Os03g0747900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myosin heavy chain class XI E1 protein.
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Os03g0747900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myosin heavy chain class XI E1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.76 | 0.506 | 5.44 | 0.0489 | 1.26 | 1.05 | -0.237 | -0.327 | 0.251 | 8.32 | 20.5 | 1000 | -- | -- |
| 115.89 | 0.501 | 5.44 | 0.00337 | 1.28 | 1.1 | -0.317 | -- | 0.244 | 8.32 | 20.5 | 1065 | -- | -- |
| 115.93 | 0.501 | 5.43 | 0.053 | 1.26 | 1.04 | -- | -0.372 | 0.252 | 8.33 | 20.5 | 1001 | -- | -- |
| 116.19 | 0.502 | 5.44 | -0.00695 | 1.28 | 1.1 | -- | -- | 0.243 | 8.33 | 20.51 | 1065 | -- | -- |
| 198.68 | 0.656 | 5.46 | 0.114 | -- | 1.26 | -- | -0.308 | 0.329 | -- | 20.8 | 821 | -- | -- |
| 147.48 | 0.569 | 5.5 | -0.442 | 1.35 | -- | -0.266 | -- | -0.00805 | 8.64 | -- | -- | -- | -- |
| 147.71 | 0.569 | 5.5 | -0.451 | 1.35 | -- | -- | -- | -0.00805 | 8.64 | -- | -- | -- | -- |
| 199.04 | 0.657 | 5.46 | 0.0498 | -- | 1.28 | -- | -- | 0.325 | -- | 20.8 | 825 | -- | -- |
| 116.2 | 0.502 | 5.44 | -- | 1.28 | 1.1 | -- | -- | 0.244 | 8.33 | 20.52 | 1065 | -- | -- |
| 250.97 | 0.74 | 5.53 | -0.447 | -- | -- | -- | -- | 0.00371 | -- | -- | -- | -- | -- |
| 153.07 | 0.579 | 5.49 | -- | 1.35 | -- | -- | -- | 0.0422 | 8.66 | -- | -- | -- | -- |
| 199.08 | 0.657 | 5.46 | -- | -- | 1.27 | -- | -- | 0.308 | -- | 20.82 | 824 | -- | -- |
| 256.24 | 0.747 | 5.52 | -- | -- | -- | -- | -- | 0.0533 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 2 | 111.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 15 | 111.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 16 | 111.77 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 20 | 111.89 | temperature | 20 | 270 | > th | dose dependent | sin | 2 | NA |
| 61 | 112.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 62 | 112.96 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 65 | 113.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 84 | 113.31 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 103 | 113.62 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 139 | 113.95 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 8 |
| 170 | 114.26 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 173 | 114.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 193 | 114.51 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 11 |
| 194 | 114.51 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 15 |
| 196 | 114.56 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 8 |
| 209 | 114.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 3 |
| 219 | 114.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 236 | 114.90 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 238 | 114.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 254 | 115.03 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 335 | 115.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 407 | 115.94 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 16 |
| 569 | 116.64 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 16 |
| 643 | 117.00 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 21 |
| 695 | 117.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 697 | 117.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |