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Os03g0747800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O- acetylserine (Thiol)-lyase) (CSase) (OAS-TL).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0181) R2 : 0.00748
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0705 (0.038) R2dN8 : 0.00966 R2N8 : 0.00748
σ : 0.34
deviance : 53.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.73 0.269 10.3 -0.162 0.437 0.374 -0.176 -0.553 0.14 23.2 1009 1836 -- --
33.71 0.27 10.3 -0.116 0.435 0.413 -0.211 -- 0.158 23.2 1009 1831 -- --
32.85 0.267 10.3 -0.158 0.437 0.373 -- -0.576 0.141 23.2 1009 1851 -- --
33.91 0.271 10.3 -0.107 0.437 0.411 -- -- 0.156 23.2 1009 1831 -- --
44.15 0.309 10.3 -0.164 -- 0.444 -- -0.611 0.204 -- 1009 1987 -- --
38.66 0.291 10.4 -0.0277 0.473 -- -0.253 -- 0.0638 23.5 -- -- -- --
38.93 0.292 10.4 -0.0173 0.474 -- -- -- 0.065 23.5 -- -- -- --
45.37 0.314 10.3 -0.117 -- 0.479 -- -- 0.206 -- 1009 1988 -- --
34.2 0.272 10.3 -- 0.438 0.393 -- -- 0.164 23.2 1009 1831 -- --
53.06 0.34 10.3 -0.00471 -- -- -- -- 0.07 -- -- -- -- --
38.94 0.292 10.4 -- 0.474 -- -- -- 0.0669 23.5 -- -- -- --
45.72 0.315 10.3 -- -- 0.459 -- -- 0.212 -- 1009 1965 -- --
53.06 0.34 10.3 -- -- -- -- -- 0.0705 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.20 temperature 10.0 270 > th dose dependent rect. 13 18
20 31.35 temperature 15.0 270 > th dose independent rect. 13 18
31 31.64 temperature 15.0 10 > th dose dependent rect. 15 17
47 31.88 atmosphere 1010.0 270 < th dose independent rect. 13 18
54 31.93 wind 7.0 1440 > th dose independent rect. 2 6
63 32.03 humidity 90.0 14400 < th dose independent rect. 24 7
73 32.13 wind 1.0 270 > th dose independent rect. 7 17
78 32.16 humidity 90.0 14400 > th dose independent rect. 24 7
81 32.18 wind 7.0 1440 > th dose independent rect. 7 1
112 32.34 humidity 80.0 14400 > th dose dependent rect. 24 3
118 32.37 radiation 1.0 270 < th dose dependent rect. 6 20
122 32.39 wind 7.0 1440 > th dose dependent rect. 2 8
124 32.40 wind 1.0 270 > th dose independent rect. 18 8
135 32.43 humidity 80.0 14400 > th dose dependent rect. 1 1
145 32.47 wind 7.0 4320 < th dose independent rect. 24 1
156 32.52 wind 1.0 43200 < th dose independent rect. 2 1
167 32.57 wind 1.0 43200 > th dose independent rect. 2 1
169 32.57 wind 1.0 43200 < th dose dependent rect. 2 1
170 32.57 humidity 80.0 14400 > th dose dependent rect. 24 6
175 32.58 radiation 1.0 270 < th dose independent rect. 8 18
177 32.58 radiation 1.0 270 < th dose dependent rect. 15 11
180 32.59 wind 7.0 1440 > th dose dependent rect. 7 1
183 32.60 temperature 20.0 270 > th dose independent rect. 24 7
198 32.62 temperature 30.0 270 < th dose dependent rect. 7 19
202 32.64 temperature 10.0 270 > th dose dependent rect. 24 7
222 32.68 temperature 15.0 10 > th dose independent rect. 15 17
230 32.71 radiation 1.0 270 < th dose independent rect. 15 11
241 32.72 wind 9.0 1440 > th dose independent rect. 1 9
264 32.77 radiation 1.0 1440 > th dose independent rect. 10 5
273 32.78 radiation 1.0 270 < th dose dependent sin 15 NA
284 32.81 atmosphere 1010.0 270 < th dose independent rect. 23 9
326 32.89 temperature 30.0 270 < th dose dependent rect. 17 9
331 32.90 radiation 1.0 90 < th dose dependent sin 13 NA
336 32.91 atmosphere 1000.0 270 > th dose independent rect. 13 18
341 32.91 atmosphere 1015.0 270 < th dose dependent rect. 13 18
343 32.92 radiation 1.0 270 > th dose independent rect. 13 17
344 32.92 wind 5.0 1440 > th dose dependent rect. 2 5
346 32.92 temperature 10.0 270 > th dose dependent rect. 12 9
351 32.93 atmosphere 1000.0 270 > th dose independent rect. 24 7
367 32.96 radiation 10.0 270 < th dose independent rect. 24 8
376 32.97 wind 9.0 4320 < th dose independent rect. 24 3
379 32.97 wind 9.0 1440 > th dose dependent rect. 9 1
396 32.98 humidity 90.0 14400 > th dose dependent rect. 3 4
399 32.99 wind 1.0 270 > th dose independent rect. 7 6
401 32.99 radiation 40.0 270 < th dose independent rect. 12 19
428 33.02 humidity 50.0 270 > th dose independent rect. 7 6
432 33.02 radiation 30.0 270 < th dose dependent rect. 24 8
460 33.06 precipitation 0.1 270 < th dose independent rect. 13 18
466 33.06 precipitation 0.1 270 < th dose dependent rect. 13 18
470 33.07 radiation 1.0 270 < th dose independent sin 15 NA
495 33.09 temperature 10.0 270 > th dose independent rect. 7 6
496 33.09 atmosphere 995.0 270 > th dose independent rect. 7 6
497 33.09 atmosphere 1015.0 270 < th dose independent rect. 7 6
502 33.09 temperature 15.0 720 > th dose dependent sin 17 NA
508 33.10 precipitation 0.1 270 < th dose independent rect. 7 6
510 33.10 wind 9.0 270 < th dose independent rect. 7 17
516 33.10 precipitation 0.1 270 < th dose dependent rect. 7 6
517 33.10 atmosphere 995.0 270 > th dose dependent rect. 18 8
545 33.12 wind 5.0 1440 < th dose independent rect. 2 5
547 33.12 wind 9.0 270 < th dose independent rect. 24 7
549 33.12 temperature 30.0 270 < th dose independent rect. 24 7
550 33.12 humidity 50.0 270 > th dose independent rect. 24 7
554 33.12 radiation 40.0 270 < th dose independent rect. 24 7
556 33.12 temperature 10.0 270 > th dose independent rect. 7 17
576 33.14 wind 1.0 90 > th dose independent rect. 7 8
595 33.16 wind 9.0 270 < th dose independent rect. 7 6
609 33.17 atmosphere 995.0 270 > th dose dependent rect. 7 18
611 33.18 atmosphere 1000.0 270 > th dose independent rect. 2 16
614 33.19 wind 5.0 1440 < th dose independent rect. 4 2
619 33.19 wind 3.0 4320 > th dose dependent rect. 24 2
620 33.19 humidity 50.0 14400 > th dose dependent rect. 1 2
629 33.20 radiation 1.0 270 > th dose independent rect. 13 5
652 33.21 radiation 20.0 30 < th dose independent rect. 13 21
660 33.21 temperature 30.0 720 < th dose dependent rect. 11 17
667 33.22 wind 1.0 43200 > th dose independent rect. 9 2
670 33.22 precipitation 0.1 270 < th dose independent rect. 24 7
680 33.22 precipitation 0.1 270 < th dose dependent rect. 24 7
690 33.22 atmosphere 1005.0 270 > th dose dependent rect. 7 19
711 33.24 wind 1.0 43200 < th dose independent rect. 9 2
722 33.24 radiation 40.0 10 < th dose dependent rect. 13 21
736 33.26 radiation 1.0 270 > th dose independent sin 15 NA
750 33.27 radiation 1.0 1440 < th dose independent rect. 13 2
756 33.27 radiation 1.0 1440 < th dose dependent rect. 13 2
769 33.28 wind 9.0 270 < th dose independent rect. 13 18
775 33.29 temperature 25.0 270 > th dose independent rect. 13 6
776 33.29 atmosphere 1000.0 270 > th dose independent rect. 12 7
790 33.30 temperature 25.0 270 > th dose independent rect. 12 8
794 33.30 humidity 90.0 14400 > th dose dependent rect. 4 2
819 33.32 humidity 50.0 270 > th dose dependent rect. 24 7
825 33.33 wind 9.0 1440 < th dose independent rect. 9 1
831 33.33 precipitation 0.1 270 < th dose independent rect. 7 17
838 33.33 precipitation 0.1 270 < th dose dependent rect. 7 17
882 33.36 humidity 50.0 270 > th dose independent rect. 7 17
892 33.36 wind 9.0 270 < th dose dependent rect. 13 18
903 33.37 temperature 15.0 270 > th dose independent rect. 2 16
932 33.38 radiation 1.0 4320 < th dose independent rect. 18 8
939 33.38 wind 1.0 90 > th dose independent rect. 7 22
951 33.39 wind 9.0 1440 > th dose independent rect. 9 1
1000 33.41 humidity 90.0 270 < th dose independent rect. 12 7