Os03g0747100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0747100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.56 | 0.571 | 7.27 | -1.66 | 0.795 | -2.25 | -1.71 | -1.74 | 0.415 | 22.9 | 0.009992 | 9974 | -- | -- |
| 150.29 | 0.571 | 7.27 | -1.67 | 0.76 | -1.65 | -1.51 | -- | 0.453 | 22.8 | 0.009996 | 9925 | -- | -- |
| 159.24 | 0.588 | 7.27 | -1.63 | 0.866 | -2.13 | -- | -1.39 | 0.424 | 22.6 | 0.01 | 10025 | -- | -- |
| 160.46 | 0.59 | 7.28 | -1.79 | 0.783 | -1.78 | -- | -- | 0.395 | 22.7 | 0.009932 | 9940 | -- | -- |
| 187.13 | 0.637 | 7.25 | -1.73 | -- | -2.68 | -- | -1.91 | 0.385 | -- | 0.006218 | 11173 | -- | -- |
| 201.66 | 0.666 | 7.25 | -1.15 | 0.929 | -- | -1.55 | -- | 0.66 | 22.8 | -- | -- | -- | -- |
| 211.74 | 0.681 | 7.25 | -1.08 | 0.94 | -- | -- | -- | 0.666 | 22.7 | -- | -- | -- | -- |
| 189.34 | 0.641 | 7.3 | -1.96 | -- | -2.19 | -- | -- | 0.335 | -- | 0.007934 | 11175 | -- | -- |
| 229.93 | 0.706 | 7.25 | -- | 1.02 | -1.01 | -- | -- | 0.638 | 23.3 | 1.409 | 9050 | -- | -- |
| 266.23 | 0.762 | 7.23 | -1.06 | -- | -- | -- | -- | 0.671 | -- | -- | -- | -- | -- |
| 242.66 | 0.729 | 7.23 | -- | 0.932 | -- | -- | -- | 0.787 | 22.6 | -- | -- | -- | -- |
| 240.1 | 0.724 | 7.2 | -- | -- | 0.72 | -- | -- | 0.806 | -- | 2.33 | 9728 | -- | -- |
| 296.14 | 0.803 | 7.2 | -- | -- | -- | -- | -- | 0.789 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 3 | 143.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 4 | 143.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 5 | 143.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 144.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 9 | 144.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 15 | 144.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 26 | 145.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 28 | 145.50 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 46 | 145.62 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 47 | 145.62 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 48 | 145.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 50 | 145.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 63 | 146.03 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 125 | 146.72 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 133 | 146.85 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 137 | 146.89 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 151 | 146.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 158 | 147.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 180 | 147.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 183 | 147.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 186 | 147.29 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 192 | 147.31 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 200 | 147.36 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 18 |
| 211 | 147.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 213 | 147.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 233 | 147.67 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 234 | 147.67 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 246 | 147.84 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 252 | 147.86 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 262 | 147.89 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 263 | 147.89 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 5 | 19 |
| 264 | 147.90 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 276 | 147.91 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 295 | 147.93 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 297 | 147.93 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 308 | 147.93 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 314 | 147.94 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 326 | 147.94 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 14 | 22 |
| 377 | 147.97 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 18 | 6 |
| 422 | 147.98 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 424 | 147.99 | atmosphere | 1000.0 | 14400 | > th | dose dependent | no | NA | NA |
| 464 | 148.00 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 465 | 148.00 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 476 | 148.02 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 640 | 148.23 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 18 | NA |
| 651 | 148.25 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 705 | 148.35 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 706 | 148.35 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 745 | 148.45 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 809 | 148.62 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 846 | 148.72 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 847 | 148.72 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 849 | 148.72 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 850 | 148.72 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 852 | 148.73 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 863 | 148.76 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 882 | 148.79 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 903 | 148.82 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 940 | 148.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 961 | 148.93 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 983 | 148.98 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 994 | 149.01 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 20 |