Os03g0745500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0745500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.17 | 0.418 | 9.32 | -3.01 | 1.26 | 1.03 | 0.958 | -4.23 | -0.387 | 4.43 | 16.11 | 671 | -- | -- |
| 93.05 | 0.449 | 9.23 | -2.24 | 1.27 | 1.1 | 1.49 | -- | -0.194 | 4.72 | 14.71 | 683 | -- | -- |
| 80.8 | 0.419 | 9.32 | -3.05 | 1.31 | 1.01 | -- | -4.54 | -0.402 | 4.23 | 16.45 | 583 | -- | -- |
| 96.84 | 0.458 | 9.23 | -2.22 | 1.08 | 0.847 | -- | -- | -0.171 | 3.83 | 9.001 | 1178 | -- | -- |
| 151.65 | 0.574 | 9.32 | -2.89 | -- | 1.23 | -- | -2.95 | -0.363 | -- | -0.9023 | 1108 | -- | -- |
| 106.88 | 0.485 | 9.19 | -1.95 | 1.16 | -- | 0.75 | -- | -0.0187 | 3.83 | -- | -- | -- | -- |
| 108.24 | 0.487 | 9.2 | -1.97 | 1.16 | -- | -- | -- | -0.0227 | 3.6 | -- | -- | -- | -- |
| 158.66 | 0.587 | 9.25 | -2.28 | -- | 1.2 | -- | -- | -0.204 | -- | -63.96 | 1158 | -- | -- |
| 148.2 | 0.567 | 9.06 | -- | 1.17 | -1.27 | -- | -- | 0.575 | 3.54 | -9.509 | 47520 | -- | -- |
| 182.96 | 0.632 | 9.2 | -1.92 | -- | -- | -- | -- | 0.00808 | -- | -- | -- | -- | -- |
| 210.1 | 0.678 | 9.15 | -- | 1.12 | -- | -- | -- | 0.196 | 3.61 | -- | -- | -- | -- |
| 224.45 | 0.698 | 9.07 | -- | -- | -1.2 | -- | -- | 0.579 | -- | 2.822 | 47520 | -- | -- |
| 279.93 | 0.781 | 9.15 | -- | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 3 | 73.90 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 11 | 74.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 19 |
| 100 | 75.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 164 | 76.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 252 | 77.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 22 |
| 260 | 77.87 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 473 | 79.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 476 | 79.35 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 496 | 79.45 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 14 |
| 503 | 79.52 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 540 | 79.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 548 | 79.77 | radiation | 10 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 561 | 79.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 583 | 79.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 585 | 79.94 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 10 |
| 601 | 80.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 614 | 80.08 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 641 | 80.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 656 | 80.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 9 |
| 670 | 80.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 692 | 80.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 725 | 80.69 | radiation | 20 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 784 | 80.93 | temperature | 10 | 720 | > th | dose dependent | sin | 0 | NA |
| 803 | 81.05 | wind | 1 | 270 | > th | dose independent | rect. | 7 | 7 |
| 882 | 81.38 | radiation | 40 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 902 | 81.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 912 | 81.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 916 | 81.49 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 14 | 17 |
| 948 | 81.59 | temperature | 10 | 270 | > th | dose independent | rect. | 7 | 7 |
| 949 | 81.59 | atmosphere | 995 | 270 | > th | dose independent | rect. | 7 | 7 |
| 950 | 81.59 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 7 | 7 |
| 951 | 81.59 | temperature | 10 | 270 | > th | dose independent | rect. | 14 | 17 |
| 995 | 81.72 | radiation | 40 | 270 | < th | dose independent | rect. | 14 | 17 |