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Os03g0744200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.017) R2 : 0.82
β1 : 1.14 (0.0624) R2dD : 0.136 R2D : 0.0881
β2 : 1.82 (0.0434) R2dC : 0.697 R2C : 0.662
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.351 (0.0364) R2dN8 : 0.0492 R2N8 : 0.00132
σ : 0.321
deviance : 46.86
__
_____
C
peak time of C : 16.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.47 0.306 10.9 1.1 1.57 -0.468 0.556 0.0947 0.318 17.2 0.3579 79 -- --
42.49 0.304 10.9 1.09 1.57 -0.472 0.519 -- 0.317 17.2 0.3109 74 -- --
43.19 0.306 10.9 1.11 1.58 -0.484 -- 0.0479 0.326 17.2 0.3199 74 -- --
43.17 0.306 10.9 1.1 1.58 -0.474 -- -- 0.325 17.2 0.3132 74 -- --
54.71 0.344 10.8 0.96 -- -1.58 -- 0.033 0.402 -- 2.51 493 -- --
46.15 0.318 10.9 1.13 1.82 -- 0.499 -- 0.348 16.1 -- -- -- --
46.86 0.321 10.9 1.14 1.82 -- -- -- 0.351 16.1 -- -- -- --
50 0.329 10.8 0.987 -- -1.79 -- -- 0.264 -- 2.341 528 -- --
75.4 0.404 10.9 -- 1.57 -0.501 -- -- 0.27 17.1 0.1099 77 -- --
227.95 0.705 10.8 1.06 -- -- -- -- 0.302 -- -- -- -- --
80.93 0.421 10.9 -- 1.8 -- -- -- 0.224 16.1 -- -- -- --
76.39 0.407 10.9 -- -- -1.85 -- -- 0.164 -- 0.71 535 -- --
257.74 0.749 10.9 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.81 temperature 15.0 270 > th dose dependent rect. 3 8
2 35.90 temperature 20.0 270 > th dose independent rect. 12 14
18 36.96 radiation 1.0 90 < th dose dependent sin 17 NA
30 37.26 temperature 20.0 10 > th dose independent rect. 22 10
31 37.34 atmosphere 1010.0 90 < th dose independent rect. 22 10
32 37.39 radiation 1.0 90 < th dose independent sin 16 NA
36 37.51 radiation 1.0 90 > th dose independent sin 17 NA
38 37.51 temperature 10.0 270 > th dose dependent rect. 11 14
56 37.77 temperature 20.0 270 > th dose independent rect. 4 7
58 37.80 temperature 20.0 10 > th dose independent rect. 22 21
64 37.85 temperature 30.0 270 < th dose dependent rect. 16 5
66 37.87 temperature 30.0 270 < th dose dependent rect. 19 1
68 37.92 radiation 1.0 270 < th dose dependent rect. 15 5
75 37.98 temperature 20.0 10 > th dose independent rect. 12 20
81 38.03 radiation 1.0 270 < th dose independent rect. 15 5
93 38.11 temperature 30.0 270 < th dose dependent rect. 15 7
100 38.22 atmosphere 1015.0 10 < th dose independent rect. 22 10
105 38.28 atmosphere 1015.0 270 < th dose independent rect. 21 20
108 38.29 temperature 20.0 10 > th dose dependent rect. 6 6
113 38.35 temperature 25.0 270 > th dose independent rect. 2 8
115 38.35 atmosphere 1015.0 90 < th dose independent rect. 21 22
144 38.46 temperature 10.0 10 > th dose dependent rect. 22 10
145 38.48 radiation 1.0 270 > th dose independent rect. 11 6
157 38.54 humidity 50.0 30 > th dose dependent rect. 22 10
162 38.56 temperature 20.0 30 > th dose independent rect. 12 7
166 38.56 temperature 10.0 90 > th dose dependent rect. 22 10
185 38.62 radiation 20.0 270 < th dose dependent rect. 21 11
189 38.64 temperature 20.0 10 > th dose dependent rect. 6 8
205 38.72 temperature 10.0 270 > th dose dependent rect. 20 10
212 38.76 temperature 25.0 10 > th dose dependent sin 7 NA
227 38.82 humidity 50.0 270 > th dose independent rect. 16 19
242 38.86 humidity 60.0 270 > th dose independent rect. 17 17
248 38.88 temperature 20.0 270 > th dose independent rect. 11 6
250 38.88 temperature 30.0 720 < th dose dependent rect. 17 1
282 38.97 radiation 1.0 90 > th dose independent rect. 11 19
288 38.98 temperature 30.0 90 < th dose dependent rect. 17 10
298 39.00 humidity 50.0 270 > th dose dependent rect. 17 3
305 39.03 wind 9.0 10 < th dose independent rect. 19 17
307 39.03 humidity 50.0 30 > th dose independent rect. 19 17
325 39.07 radiation 1.0 90 > th dose independent rect. 12 17
330 39.07 temperature 30.0 30 < th dose dependent rect. 19 10
388 39.17 precipitation 0.1 270 < th dose independent rect. 21 9
394 39.17 precipitation 0.1 270 < th dose dependent rect. 21 9
395 39.17 radiation 40.0 10 < th dose dependent rect. 22 21
398 39.18 temperature 15.0 270 > th dose independent rect. 6 14
399 39.18 wind 9.0 270 < th dose independent rect. 6 15
415 39.21 wind 1.0 30 > th dose independent rect. 12 7
417 39.21 radiation 1.0 270 < th dose independent rect. 21 16
426 39.22 humidity 90.0 30 < th dose independent rect. 12 7
431 39.22 temperature 30.0 270 < th dose independent rect. 21 9
432 39.22 humidity 50.0 270 > th dose independent rect. 21 9
435 39.22 atmosphere 995.0 270 > th dose independent rect. 21 9
438 39.22 radiation 20.0 270 < th dose independent rect. 21 9
449 39.22 wind 9.0 10 < th dose independent rect. 8 14
472 39.24 temperature 25.0 10 > th dose dependent rect. 20 16
492 39.28 wind 9.0 270 < th dose independent rect. 21 9
499 39.29 precipitation 0.1 10 < th dose independent rect. 12 7
501 39.29 precipitation 0.1 10 < th dose dependent rect. 12 7
518 39.31 radiation 40.0 10 < th dose independent rect. 12 7
539 39.33 temperature 20.0 270 < th dose independent rect. 14 11
543 39.33 radiation 1.0 270 < th dose dependent rect. 21 16
544 39.34 wind 1.0 270 > th dose independent rect. 11 5
546 39.34 temperature 10.0 10 > th dose independent rect. 12 7
548 39.34 atmosphere 1015.0 10 < th dose independent rect. 12 7
553 39.34 temperature 10.0 10 > th dose independent rect. 19 17
554 39.34 atmosphere 995.0 10 > th dose independent rect. 19 17
559 39.34 temperature 10.0 30 > th dose dependent rect. 12 7
564 39.34 temperature 15.0 10 > th dose dependent rect. 14 13
566 39.35 temperature 20.0 270 > th dose independent rect. 13 2
605 39.38 precipitation 0.1 270 < th dose independent rect. 10 7
616 39.38 precipitation 0.1 270 < th dose dependent rect. 10 7
624 39.39 humidity 70.0 10 > th dose independent rect. 19 3
626 39.39 wind 1.0 270 > th dose independent rect. 10 7
638 39.40 radiation 10.0 270 < th dose independent rect. 20 11
641 39.40 wind 9.0 270 < th dose independent rect. 16 19
650 39.41 wind 9.0 10 < th dose independent rect. 12 7
652 39.41 temperature 10.0 1440 > th dose independent rect. 13 7
656 39.41 temperature 10.0 1440 > th dose independent rect. 20 17
659 39.41 atmosphere 995.0 1440 > th dose independent rect. 20 17
687 39.44 humidity 60.0 270 > th dose independent rect. 17 4
688 39.44 wind 9.0 10 < th dose independent rect. 22 10
690 39.44 temperature 30.0 10 < th dose independent rect. 22 10
691 39.44 humidity 50.0 10 > th dose independent rect. 22 10
693 39.44 atmosphere 995.0 10 > th dose independent rect. 22 10
696 39.44 temperature 10.0 10 > th dose independent rect. 8 14
699 39.44 atmosphere 1015.0 10 < th dose independent rect. 8 14
701 39.44 wind 9.0 270 < th dose independent rect. 17 17
708 39.45 precipitation 0.1 270 < th dose independent rect. 11 5
717 39.45 precipitation 0.1 270 < th dose dependent rect. 11 5
731 39.46 temperature 15.0 270 > th dose dependent rect. 12 4
732 39.46 wind 1.0 30 > th dose dependent rect. 12 7
737 39.47 temperature 10.0 270 > th dose independent rect. 10 7
739 39.47 atmosphere 1015.0 270 < th dose independent rect. 10 7
741 39.47 temperature 20.0 10 < th dose independent rect. 14 14
742 39.47 humidity 50.0 270 > th dose independent rect. 6 14
743 39.47 temperature 10.0 270 > th dose independent rect. 17 17
753 39.48 temperature 10.0 270 > th dose independent rect. 11 5
754 39.48 atmosphere 1015.0 270 < th dose independent rect. 11 5
774 39.48 atmosphere 1015.0 270 < th dose independent rect. 6 14
779 39.48 temperature 10.0 270 > th dose independent rect. 16 19
840 39.53 radiation 20.0 30 < th dose independent rect. 22 21
850 39.54 radiation 30.0 10 < th dose independent rect. 22 10
861 39.55 temperature 30.0 270 < th dose independent rect. 17 3
868 39.56 atmosphere 995.0 270 > th dose independent rect. 11 5
893 39.57 temperature 25.0 90 > th dose dependent rect. 19 16
914 39.60 humidity 90.0 270 < th dose independent rect. 11 6
916 39.60 precipitation 0.1 10 < th dose independent rect. 19 17
924 39.60 precipitation 0.1 10 < th dose dependent rect. 19 17
933 39.62 wind 9.0 270 < th dose independent rect. 11 5
939 39.62 humidity 50.0 10 > th dose dependent rect. 19 3
948 39.62 wind 9.0 90 < th dose dependent rect. 8 14
951 39.63 atmosphere 995.0 270 > th dose independent rect. 10 7
969 39.63 precipitation 0.1 270 < th dose independent rect. 21 20
975 39.63 precipitation 0.1 270 < th dose dependent rect. 21 20
992 39.65 temperature 10.0 1440 > th dose independent rect. 23 10
995 39.65 humidity 50.0 1440 > th dose independent rect. 23 10
997 39.65 atmosphere 995.0 1440 > th dose independent rect. 23 10