Os03g0738600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipoxygenase L-2 (EC 1.13.11.12).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0738600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Lipoxygenase L-2 (EC 1.13.11.12).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 467.49 | 1.02 | 3.25 | -0.126 | 0.405 | -1.99 | 0.477 | 3.61 | 0.635 | 4.84 | 8.706 | 1188 | -- | -- |
| 468.84 | 1.01 | 3.29 | -0.0554 | 0.461 | -2.46 | 0.483 | -- | 0.602 | 4.94 | 8.8 | 1218 | -- | -- |
| 467.96 | 1.01 | 3.25 | -0.129 | 0.408 | -1.99 | -- | 3.51 | 0.631 | 4.43 | 8.8 | 1188 | -- | -- |
| 468.58 | 1.01 | 3.28 | -0.0533 | 0.412 | -2.67 | -- | -- | 0.627 | 4.4 | 8.839 | 1218 | -- | -- |
| 476.86 | 1.02 | 3.25 | -0.107 | -- | -2.04 | -- | 3.48 | 0.644 | -- | 8.725 | 1188 | -- | -- |
| 526.52 | 1.08 | 3.32 | -0.444 | 0.445 | -- | -0.00412 | -- | 0.462 | 3.95 | -- | -- | -- | -- |
| 526.52 | 1.07 | 3.32 | -0.444 | 0.445 | -- | -- | -- | 0.463 | 3.95 | -- | -- | -- | -- |
| 477.64 | 1.02 | 3.28 | -0.0383 | -- | -2.71 | -- | -- | 0.638 | -- | 8.8 | 1218 | -- | -- |
| 468.66 | 1.01 | 3.28 | -- | 0.41 | -2.7 | -- | -- | 0.633 | 4.4 | 8.836 | 1218 | -- | -- |
| 537.37 | 1.08 | 3.32 | -0.426 | -- | -- | -- | -- | 0.474 | -- | -- | -- | -- | -- |
| 531.72 | 1.08 | 3.31 | -- | 0.437 | -- | -- | -- | 0.512 | 3.96 | -- | -- | -- | -- |
| 477.66 | 1.02 | 3.28 | -- | -- | -2.73 | -- | -- | 0.644 | -- | 8.845 | 1218 | -- | -- |
| 542.16 | 1.09 | 3.31 | -- | -- | -- | -- | -- | 0.522 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 459.93 | wind | 7 | 270 | > th | dose dependent | sin | 11 | NA |
| 5 | 460.69 | wind | 9 | 720 | < th | dose independent | sin | 12 | NA |
| 9 | 461.60 | wind | 9 | 720 | > th | dose independent | sin | 12 | NA |
| 24 | 463.29 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 26 | 463.36 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 29 | 463.39 | wind | 7 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 33 | 463.46 | wind | 7 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 74 | 465.08 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 12 |
| 94 | 465.44 | wind | 7 | 720 | < th | dose independent | rect. | 12 | 17 |
| 98 | 465.63 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 116 | 465.93 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 9 |
| 145 | 466.54 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 4 |
| 153 | 466.96 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 163 | 467.05 | wind | 7 | 720 | < th | dose independent | rect. | 12 | 21 |
| 172 | 467.36 | wind | 9 | 1440 | > th | dose independent | rect. | 12 | 4 |
| 174 | 467.40 | wind | 9 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 175 | 467.41 | wind | 9 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 176 | 467.41 | wind | 9 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 178 | 467.42 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 7 |
| 249 | 468.42 | wind | 7 | 270 | > th | dose independent | rect. | 21 | 11 |
| 269 | 468.54 | wind | 9 | 720 | > th | dose independent | rect. | 21 | 5 |
| 282 | 468.55 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 4 |
| 285 | 468.56 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 3 |
| 309 | 468.80 | wind | 7 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 345 | 469.06 | wind | 9 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 378 | 469.52 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 396 | 469.69 | wind | 9 | 720 | > th | dose independent | rect. | 21 | 2 |
| 440 | 470.13 | wind | 9 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 563 | 471.31 | wind | 7 | 720 | < th | dose independent | rect. | 12 | 13 |
| 690 | 472.31 | radiation | 10 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 701 | 472.43 | wind | 7 | 720 | < th | dose independent | rect. | 15 | 16 |
| 709 | 472.47 | wind | 7 | 720 | < th | dose independent | rect. | 17 | 16 |
| 726 | 472.55 | wind | 9 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 748 | 472.72 | wind | 9 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 817 | 472.98 | wind | 7 | 720 | < th | dose independent | rect. | 16 | 8 |
| 846 | 473.12 | wind | 9 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 881 | 473.26 | wind | 9 | 1440 | < th | dose independent | sin | 21 | NA |
| 894 | 473.29 | wind | 9 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 896 | 473.29 | wind | 9 | 1440 | < th | dose independent | rect. | 22 | 19 |
| 946 | 473.47 | wind | 9 | 1440 | > th | dose independent | sin | 22 | NA |
| 989 | 473.60 | wind | 9 | 1440 | < th | dose independent | rect. | 19 | 22 |
| 998 | 473.64 | wind | 7 | 720 | < th | dose independent | rect. | 2 | 23 |