Os03g0738300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0738300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.43 | 0.347 | 8.18 | 1.11 | 0.989 | 1.88 | -0.717 | -1.31 | 0.408 | 17.6 | 0.78 | 734 | -- | -- |
| 54.31 | 0.343 | 8.19 | 1.09 | 0.923 | 1.86 | 0.186 | -- | 0.395 | 18 | 0.77 | 773 | -- | -- |
| 54.09 | 0.343 | 8.19 | 1.1 | 0.986 | 1.94 | -- | -0.438 | 0.392 | 18 | 0.76 | 773 | -- | -- |
| 54.34 | 0.343 | 8.19 | 1.09 | 1.05 | 2.02 | -- | -- | 0.396 | 18 | 0.76 | 775 | -- | -- |
| 63.38 | 0.371 | 8.2 | 1.31 | -- | 1.48 | -- | -0.184 | 0.388 | -- | 0.2798 | 2269 | -- | -- |
| 62.32 | 0.37 | 8.17 | 0.929 | 0.472 | -- | 0.0151 | -- | 0.318 | 6.34 | -- | -- | -- | -- |
| 62.32 | 0.37 | 8.17 | 0.929 | 0.472 | -- | -- | -- | 0.318 | 6.34 | -- | -- | -- | -- |
| 57.78 | 0.354 | 8.19 | 1.06 | -- | 0.988 | -- | -- | 0.374 | -- | 0.24 | 2216 | -- | -- |
| 83.66 | 0.426 | 8.18 | -- | 0.411 | 1.13 | -- | -- | 0.355 | 17.3 | 1.391 | 725 | -- | -- |
| 73.9 | 0.402 | 8.18 | 0.942 | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
| 85.09 | 0.432 | 8.2 | -- | 0.485 | -- | -- | -- | 0.214 | 6.23 | -- | -- | -- | -- |
| 82.12 | 0.422 | 8.2 | -- | -- | 0.669 | -- | -- | 0.249 | -- | 7.188 | 834 | -- | -- |
| 97.3 | 0.46 | 8.21 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.33 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 3 | 51.80 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 7 | 52.10 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 10 | 52.17 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 19 | 52.33 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 17 |
| 20 | 52.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 28 | 52.59 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 5 | 19 |
| 42 | 52.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 49 | 52.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 64 | 53.05 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 68 | 53.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 75 | 53.21 | radiation | 1.0 | 270 | > th | dose independent | sin | 0 | NA |
| 96 | 53.38 | radiation | 1.0 | 720 | > th | dose independent | rect. | 6 | 13 |
| 103 | 53.38 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 114 | 53.42 | radiation | 1.0 | 270 | < th | dose independent | sin | 0 | NA |
| 118 | 53.45 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 120 | 53.47 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 126 | 53.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 11 |
| 146 | 53.58 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 151 | 53.60 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 5 | 8 |
| 174 | 53.66 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 180 | 53.67 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 197 | 53.67 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 198 | 53.68 | radiation | 1.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 216 | 53.69 | radiation | 1.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 293 | 53.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 329 | 53.75 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 361 | 53.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 385 | 53.86 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 388 | 53.87 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 403 | 53.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 409 | 53.92 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 410 | 53.92 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 411 | 53.93 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 416 | 53.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 422 | 53.96 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 542 | 54.04 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 562 | 54.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 572 | 54.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 604 | 54.12 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 613 | 54.14 | humidity | 90.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 636 | 54.17 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 664 | 54.20 | wind | 9.0 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 671 | 54.22 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 713 | 54.27 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 719 | 54.28 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 737 | 54.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 742 | 54.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 802 | 54.41 | humidity | 90.0 | 270 | > th | dose independent | sin | 6 | NA |
| 803 | 54.41 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 818 | 54.43 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 855 | 54.48 | radiation | 1.0 | 720 | < th | dose independent | rect. | 20 | 23 |
| 880 | 54.51 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 894 | 54.52 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 895 | 54.52 | humidity | 90.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 906 | 54.54 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 968 | 54.60 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 21 |