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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0735900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phospholipid/glycerol acyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.35 (0.0212) R2 : 0.00217
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0444 (0.0445) R2dN8 : 0.0028 R2N8 : 0.00217
σ : 0.398
deviance : 72.87
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.94 0.387 3.21 1.23 0.174 -0.934 -0.128 7.62 0.12 6.77 29.02 1741 -- --
69.81 0.389 3.33 0.0934 0.221 -0.197 -0.0857 -- 0.0913 5.85 17.2 2544 -- --
67.98 0.384 3.2 1.22 0.173 -0.927 -- 7.57 0.123 6.88 28.99 1740 -- --
69.8 0.389 3.33 0.0877 0.204 -0.201 -- -- 0.0859 6.33 16.62 2443 -- --
69.5 0.388 3.2 1.27 -- -0.953 -- 7.64 0.145 -- 28.8 1752 -- --
70.59 0.394 3.34 0.0115 0.207 -- -0.15 -- 0.0414 6.71 -- -- -- --
70.65 0.394 3.34 0.00922 0.206 -- -- -- 0.0419 6.8 -- -- -- --
71.73 0.394 3.34 0.0912 -- -0.223 -- -- 0.0909 -- 17.1 2099 -- --
69.96 0.39 3.34 -- 0.204 -0.162 -- -- 0.0687 6.35 16.97 2427 -- --
72.87 0.399 3.35 0.0138 -- -- -- -- 0.0459 -- -- -- -- --
70.65 0.393 3.34 -- 0.206 -- -- -- 0.0409 6.8 -- -- -- --
71.94 0.395 3.34 -- -- -0.184 -- -- 0.0784 -- 18 2074 -- --
72.87 0.398 3.35 -- -- -- -- -- 0.0444 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.28 radiation 1.0 43200 < th dose dependent rect. 3 1
2 62.07 atmosphere 1000.0 30 > th dose independent rect. 3 23
4 62.26 atmosphere 1005.0 90 > th dose dependent rect. 2 1
5 62.30 radiation 1.0 4320 < th dose dependent rect. 3 1
17 62.44 wind 9.0 1440 < th dose independent rect. 3 1
18 62.44 temperature 10.0 1440 > th dose independent rect. 3 1
21 62.44 temperature 30.0 1440 < th dose independent rect. 3 1
25 62.44 humidity 50.0 1440 > th dose independent rect. 3 1
34 62.44 atmosphere 995.0 1440 > th dose independent rect. 3 1
35 62.44 radiation 1.0 1440 < th dose independent rect. 3 1
55 62.44 temperature 10.0 1440 > th dose independent rect. 4 23
66 62.54 temperature 20.0 30 > th dose dependent rect. 2 1
69 62.61 temperature 20.0 30 > th dose independent rect. 2 1
70 62.63 wind 3.0 30 < th dose dependent rect. 2 1
73 62.67 wind 1.0 30 < th dose independent rect. 2 1
74 62.67 atmosphere 1005.0 30 > th dose independent rect. 2 1
82 62.76 humidity 90.0 30 > th dose independent rect. 2 1
84 62.79 temperature 25.0 30 < th dose independent rect. 2 1
88 62.83 humidity 50.0 30 > th dose dependent rect. 2 1
93 62.84 temperature 10.0 30 > th dose independent rect. 2 1
96 62.84 humidity 50.0 30 > th dose independent rect. 2 1
100 62.84 atmosphere 1010.0 30 < th dose independent rect. 2 1
102 62.84 radiation 1.0 30 < th dose independent rect. 2 1
107 62.84 precipitation 0.1 30 < th dose independent rect. 2 1
108 62.84 temperature 10.0 30 > th dose independent rect. 3 23
109 62.84 radiation 1.0 30 < th dose dependent rect. 2 1
114 62.84 precipitation 0.1 30 < th dose dependent rect. 2 1
120 63.04 wind 9.0 30 < th dose independent rect. 3 23
123 63.08 atmosphere 1015.0 30 < th dose dependent rect. 2 1
125 63.19 temperature 30.0 30 < th dose dependent rect. 2 1
134 63.39 wind 1.0 30 > th dose independent rect. 2 1
140 63.48 precipitation 0.1 30 < th dose independent rect. 3 23
142 63.48 precipitation 0.1 30 < th dose dependent rect. 3 23
193 64.68 humidity 50.0 30 > th dose independent rect. 3 23
201 65.18 atmosphere 995.0 720 > th dose independent rect. 7 8
204 65.24 humidity 90.0 90 < th dose independent rect. 1 7
208 65.36 precipitation 0.1 720 < th dose independent rect. 7 8
209 65.36 precipitation 0.1 720 < th dose dependent rect. 7 8
210 65.37 temperature 10.0 30 > th dose dependent rect. 3 23
211 65.38 atmosphere 995.0 720 > th dose independent rect. 23 16
217 65.57 atmosphere 1005.0 10 > th dose dependent rect. 2 6
221 65.61 wind 9.0 720 < th dose independent rect. 19 8
229 65.82 precipitation 0.1 720 < th dose independent rect. 3 16
230 65.82 precipitation 0.1 720 < th dose dependent rect. 3 16
231 65.83 atmosphere 1000.0 10 > th dose independent rect. 21 23
235 65.85 humidity 90.0 90 < th dose independent rect. 2 1
238 65.86 atmosphere 995.0 720 > th dose independent rect. 3 16
244 65.95 wind 9.0 720 < th dose independent rect. 15 16
268 65.97 temperature 15.0 720 > th dose independent rect. 7 8
271 65.99 atmosphere 1015.0 720 < th dose independent rect. 7 8
272 65.99 temperature 10.0 720 > th dose independent rect. 15 16
275 66.03 atmosphere 995.0 720 > th dose independent rect. 15 16
279 66.08 temperature 10.0 720 > th dose independent rect. 19 8
280 66.08 temperature 30.0 720 < th dose independent rect. 19 8
281 66.08 humidity 50.0 720 > th dose independent rect. 19 8
282 66.08 atmosphere 995.0 720 > th dose independent rect. 19 8
283 66.08 radiation 1.0 720 < th dose independent rect. 19 8
288 66.08 temperature 10.0 720 > th dose independent rect. 3 16
289 66.08 atmosphere 1015.0 720 < th dose independent rect. 3 16
291 66.08 radiation 1.0 720 < th dose dependent rect. 19 8
299 66.10 precipitation 0.1 720 < th dose independent rect. 19 8
301 66.10 precipitation 0.1 720 < th dose dependent rect. 19 8
311 66.25 wind 9.0 10 < th dose independent rect. 21 23
314 66.28 wind 1.0 10 > th dose independent rect. 21 23
319 66.36 temperature 10.0 720 > th dose independent rect. 15 8
320 66.36 temperature 10.0 720 > th dose independent rect. 23 16
327 66.44 atmosphere 1015.0 720 < th dose independent rect. 3 8
328 66.44 precipitation 0.1 720 < th dose independent rect. 23 16
329 66.44 precipitation 0.1 720 < th dose dependent rect. 23 16
336 66.49 wind 9.0 720 < th dose independent rect. 15 8
340 66.53 atmosphere 1000.0 720 > th dose independent rect. 3 8
342 66.56 wind 9.0 720 < th dose independent rect. 3 8
347 66.61 temperature 10.0 720 > th dose independent rect. 3 8
349 66.61 temperature 10.0 720 > th dose independent rect. 11 16
355 66.66 temperature 15.0 90 > th dose independent rect. 21 14
356 66.66 temperature 15.0 30 > th dose independent rect. 21 23
363 66.71 wind 5.0 14400 < th dose dependent rect. 11 1
365 66.72 humidity 90.0 90 < th dose dependent rect. 2 5
366 66.73 wind 1.0 10 < th dose independent rect. 13 14
369 66.74 temperature 30.0 720 < th dose independent rect. 15 16
370 66.74 radiation 1.0 1440 < th dose dependent rect. 21 1
372 66.75 wind 1.0 10 < th dose independent rect. 6 21
375 66.77 humidity 50.0 720 > th dose independent rect. 3 8
385 66.81 atmosphere 1005.0 10 > th dose independent rect. 20 1
400 66.84 humidity 80.0 14400 < th dose dependent rect. 2 7
401 66.86 wind 5.0 30 < th dose dependent rect. 2 7
406 66.88 humidity 90.0 10 < th dose dependent rect. 20 1
413 66.91 wind 5.0 10 < th dose dependent rect. 20 1
414 66.91 temperature 30.0 10 < th dose dependent rect. 20 1
417 66.92 precipitation 0.1 720 < th dose independent rect. 15 8
420 66.92 precipitation 0.1 720 < th dose dependent rect. 15 8
421 66.93 temperature 15.0 90 > th dose independent rect. 9 16
426 66.95 wind 5.0 14400 < th dose independent rect. 9 8
430 66.96 precipitation 0.1 720 < th dose independent rect. 3 8
432 66.96 precipitation 0.1 720 < th dose dependent rect. 3 8
434 66.96 temperature 10.0 30 > th dose dependent rect. 21 23
437 66.98 wind 5.0 10 < th dose independent rect. 20 1
440 66.99 wind 5.0 14400 > th dose independent rect. 9 8
445 67.00 wind 5.0 14400 < th dose independent rect. 11 1
451 67.01 wind 1.0 10 > th dose independent rect. 20 1
454 67.01 temperature 10.0 10 > th dose independent rect. 20 1
456 67.01 temperature 30.0 10 < th dose independent rect. 20 1
457 67.01 humidity 50.0 10 > th dose independent rect. 20 1
460 67.01 atmosphere 995.0 10 > th dose independent rect. 20 1
462 67.01 atmosphere 1010.0 10 < th dose independent rect. 20 1
464 67.01 radiation 1.0 10 < th dose independent rect. 20 1
469 67.01 precipitation 0.1 10 < th dose independent rect. 20 1
471 67.01 atmosphere 995.0 10 > th dose dependent rect. 20 1
473 67.01 radiation 1.0 10 < th dose dependent rect. 20 1
478 67.01 precipitation 0.1 10 < th dose dependent rect. 20 1
481 67.02 wind 1.0 14400 > th dose dependent rect. 11 1
488 67.04 humidity 90.0 10 < th dose independent rect. 20 1
490 67.04 radiation 10.0 30 < th dose dependent rect. 3 23
494 67.05 temperature 30.0 270 < th dose independent rect. 10 11
505 67.07 temperature 25.0 30 > th dose dependent rect. 20 2
507 67.08 humidity 80.0 14400 > th dose independent rect. 12 1
534 67.09 atmosphere 1015.0 10 < th dose dependent rect. 20 1
560 67.10 atmosphere 1005.0 30 > th dose independent rect. 2 7
562 67.10 humidity 50.0 10 > th dose dependent rect. 20 1
571 67.11 atmosphere 1015.0 30 < th dose independent rect. 3 23
572 67.11 temperature 10.0 10 > th dose dependent rect. 20 1
582 67.13 temperature 30.0 30 < th dose independent rect. 3 23
585 67.13 temperature 10.0 30 > th dose dependent rect. 9 17
599 67.15 wind 1.0 14400 < th dose dependent rect. 2 1
607 67.17 wind 1.0 30 > th dose dependent rect. 20 1
614 67.18 wind 5.0 43200 < th dose dependent rect. 19 1
622 67.19 humidity 80.0 14400 < th dose independent rect. 12 1
623 67.19 humidity 80.0 14400 < th dose independent rect. 7 7
624 67.19 atmosphere 995.0 10 > th dose independent rect. 11 23
625 67.20 temperature 10.0 1440 > th dose independent rect. 21 1
628 67.20 temperature 30.0 1440 < th dose independent rect. 21 1
632 67.20 humidity 50.0 1440 > th dose independent rect. 21 1
638 67.20 atmosphere 995.0 1440 > th dose independent rect. 21 1
639 67.20 radiation 1.0 1440 < th dose independent rect. 21 1
662 67.20 temperature 10.0 1440 > th dose independent rect. 22 23
669 67.21 radiation 40.0 14400 < th dose dependent rect. 21 1
673 67.22 wind 3.0 43200 > th dose independent rect. 19 2
674 67.22 humidity 80.0 14400 > th dose independent rect. 7 6
683 67.23 wind 5.0 14400 > th dose independent rect. 11 1
686 67.23 humidity 90.0 14400 > th dose independent rect. 8 1
704 67.25 wind 3.0 43200 < th dose independent rect. 19 2
710 67.26 temperature 15.0 30 > th dose independent rect. 21 5
727 67.28 atmosphere 995.0 30 > th dose independent rect. 10 15
728 67.28 precipitation 0.1 720 < th dose independent rect. 15 16
732 67.28 humidity 80.0 14400 > th dose dependent rect. 12 1
733 67.28 precipitation 0.1 720 < th dose dependent rect. 15 16
734 67.29 temperature 15.0 1440 > th dose independent rect. 11 1
741 67.29 wind 1.0 10 > th dose independent rect. 21 14
744 67.29 wind 3.0 14400 > th dose dependent rect. 9 6
746 67.30 wind 1.0 14400 < th dose independent rect. 2 1
751 67.30 precipitation 0.1 30 < th dose independent rect. 21 23
762 67.30 precipitation 0.1 30 < th dose dependent rect. 21 23
763 67.31 humidity 70.0 14400 > th dose independent rect. 8 1
774 67.32 wind 1.0 10 > th dose independent rect. 21 9
782 67.33 humidity 90.0 14400 > th dose independent rect. 2 8
787 67.34 precipitation 0.1 14400 > th dose independent rect. 1 9
790 67.34 humidity 80.0 14400 > th dose dependent rect. 7 6
795 67.35 humidity 90.0 14400 > th dose dependent rect. 8 1
814 67.37 wind 1.0 14400 > th dose independent rect. 2 1
816 67.37 wind 7.0 10 < th dose independent rect. 9 17
823 67.38 wind 3.0 30 < th dose independent rect. 2 7
827 67.38 precipitation 0.1 14400 < th dose independent rect. 1 9
835 67.38 precipitation 0.1 14400 < th dose dependent rect. 1 9
837 67.39 temperature 15.0 270 > th dose independent rect. 21 1
838 67.39 humidity 90.0 14400 < th dose independent rect. 8 1
847 67.39 humidity 80.0 720 > th dose dependent rect. 3 1
851 67.39 temperature 25.0 720 > th dose dependent rect. 3 6
859 67.40 temperature 15.0 10 > th dose independent rect. 14 12
862 67.40 radiation 40.0 720 < th dose independent rect. 15 16
953 67.46 temperature 15.0 720 > th dose independent rect. 14 1
969 67.47 humidity 70.0 14400 < th dose independent rect. 8 1