Os03g0735200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os03g0735200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.53 | 0.478 | 6.12 | 2.94 | 2.17 | -1.23 | 0.854 | 3.3 | 0.0417 | 18.1 | 10.44 | 1381 | -- | -- |
| 113.37 | 0.496 | 6.22 | 2.3 | 2.17 | -1.15 | 0.708 | -- | -0.161 | 18 | 14.91 | 1404 | -- | -- |
| 105.31 | 0.478 | 6.12 | 2.9 | 2.17 | -1.24 | -- | 3.16 | 0.0364 | 18.2 | 11.68 | 1360 | -- | -- |
| 113.78 | 0.497 | 6.21 | 2.2 | 2.17 | -1.23 | -- | -- | -0.149 | 18.2 | 14.13 | 1263 | -- | -- |
| 348.25 | 0.869 | 6.08 | 2.88 | -- | -1.53 | -- | 2.98 | 0.0288 | -- | 14.1 | 1318 | -- | -- |
| 137.18 | 0.549 | 6.26 | 1.84 | 2.22 | -- | 0.693 | -- | -0.37 | 18 | -- | -- | -- | -- |
| 138.36 | 0.551 | 6.26 | 1.83 | 2.22 | -- | -- | -- | -0.367 | 18 | -- | -- | -- | -- |
| 355.73 | 0.878 | 6.16 | 2.23 | -- | -1.49 | -- | -- | -0.145 | -- | 13.07 | 1318 | -- | -- |
| 224.61 | 0.698 | 6.3 | -- | 2.2 | -0.246 | -- | -- | -0.534 | 18.2 | 20.9 | 1076 | -- | -- |
| 393.77 | 0.927 | 6.22 | 1.77 | -- | -- | -- | -- | -0.417 | -- | -- | -- | -- | -- |
| 226.64 | 0.704 | 6.31 | -- | 2.19 | -- | -- | -- | -0.571 | 18.1 | -- | -- | -- | -- |
| 451.05 | 0.992 | 6.3 | -- | -- | 1 | -- | -- | -0.751 | -- | 20.9 | 1076 | -- | -- |
| 476.03 | 1.02 | 6.27 | -- | -- | -- | -- | -- | -0.613 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 59 | 99.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 169 | 100.47 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 250 | 101.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 268 | 101.16 | temperature | 30 | 1440 | < th | dose dependent | sin | 19 | NA |
| 350 | 101.66 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 804 | 103.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 940 | 103.66 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |