Os03g0734700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os03g0734700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.8 | 0.261 | 9.86 | -0.841 | 0.367 | -0.348 | 0.285 | -1.1 | -0.0778 | 11.7 | 24.4 | 4018 | -- | -- |
| 31.23 | 0.26 | 9.82 | -0.581 | 0.38 | -0.418 | 0.356 | -- | -0.00847 | 11.8 | 24.52 | 3182 | -- | -- |
| 31.14 | 0.26 | 9.86 | -0.846 | 0.366 | -0.347 | -- | -1.18 | -0.0787 | 11.6 | 24.39 | 3981 | -- | -- |
| 31.61 | 0.262 | 9.83 | -0.58 | 0.368 | -0.445 | -- | -- | -0.0576 | 11.6 | 26.7 | 4055 | -- | -- |
| 38.38 | 0.289 | 9.85 | -0.819 | -- | -0.422 | -- | -0.992 | -0.0387 | -- | 24.1 | 2417 | -- | -- |
| 37.04 | 0.285 | 9.83 | -0.724 | 0.413 | -- | 0.377 | -- | -0.0467 | 11.9 | -- | -- | -- | -- |
| 37.65 | 0.287 | 9.83 | -0.71 | 0.412 | -- | -- | -- | -0.0453 | 11.8 | -- | -- | -- | -- |
| 38.71 | 0.29 | 9.82 | -0.545 | -- | -0.527 | -- | -- | 0.0204 | -- | 24.24 | 2438 | -- | -- |
| 39.59 | 0.293 | 9.8 | -- | 0.333 | -0.516 | -- | -- | 0.091 | 10.8 | 23.6 | 5464 | -- | -- |
| 48.34 | 0.325 | 9.84 | -0.722 | -- | -- | -- | -- | -0.0505 | -- | -- | -- | -- | -- |
| 50.92 | 0.334 | 9.81 | -- | 0.421 | -- | -- | -- | 0.0337 | 11.9 | -- | -- | -- | -- |
| 43.96 | 0.309 | 9.77 | -- | -- | -0.645 | -- | -- | 0.249 | -- | 17.59 | 47520 | -- | -- |
| 62.08 | 0.368 | 9.82 | -- | -- | -- | -- | -- | 0.0296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 12 |
| 2 | 30.49 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 10 | 30.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 13 | 30.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 15 | 30.55 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 29 | 30.61 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 49 | 30.69 | temperature | 25 | 4320 | < th | dose independent | sin | 7 | NA |
| 102 | 30.81 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 117 | 30.83 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 9 |
| 118 | 30.83 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 13 |
| 130 | 30.84 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 15 |
| 132 | 30.84 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 16 |
| 140 | 30.85 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 176 | 30.87 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 19 |
| 179 | 30.88 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 208 | 30.89 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 223 | 30.89 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 19 |
| 230 | 30.89 | temperature | 25 | 4320 | > th | dose dependent | rect. | 14 | 21 |
| 315 | 30.92 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 375 | 30.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 415 | 30.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 536 | 30.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 537 | 30.98 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 758 | 31.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 10 | 16 |
| 850 | 31.04 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 10 |
| 894 | 31.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 898 | 31.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 930 | 31.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 18 |