Os03g0734400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L7/L12 family protein.
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Os03g0734400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L7/L12 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.97 | 0.438 | 7.49 | 0.271 | 1.07 | 0.592 | 0.269 | -0.965 | -0.00642 | 15.5 | 78.37 | 713 | -- | -- |
| 88.95 | 0.439 | 7.49 | 0.183 | 1.07 | 0.583 | 0.285 | -- | -0.0148 | 15.5 | 78.95 | 711 | -- | -- |
| 87.19 | 0.435 | 7.49 | 0.278 | 1.07 | 0.59 | -- | -0.962 | -0.00523 | 15.5 | 77.94 | 710 | -- | -- |
| 89.18 | 0.44 | 7.49 | 0.187 | 1.07 | 0.577 | -- | -- | -0.0202 | 15.5 | 78.46 | 718 | -- | -- |
| 114.76 | 0.502 | 7.51 | 0.224 | -- | -0.885 | -- | -0.508 | -0.136 | -- | 61.55 | 1129 | -- | -- |
| 94.22 | 0.455 | 7.49 | 0.219 | 1.04 | -- | 0.0935 | -- | -0.0797 | 14.5 | -- | -- | -- | -- |
| 94.25 | 0.455 | 7.49 | 0.222 | 1.04 | -- | -- | -- | -0.0792 | 14.5 | -- | -- | -- | -- |
| 115.51 | 0.503 | 7.51 | 0.209 | -- | -0.868 | -- | -- | -0.15 | -- | 63.93 | 1133 | -- | -- |
| 90.1 | 0.442 | 7.49 | -- | 1.06 | 0.585 | -- | -- | -0.0326 | 15.5 | 79.9 | 711 | -- | -- |
| 157.52 | 0.586 | 7.5 | 0.178 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 95.55 | 0.457 | 7.5 | -- | 1.03 | -- | -- | -- | -0.104 | 14.5 | -- | -- | -- | -- |
| 116.48 | 0.504 | 7.52 | -- | -- | -0.834 | -- | -- | -0.185 | -- | 66.94 | 1128 | -- | -- |
| 158.36 | 0.587 | 7.51 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.81 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 4 | 79.64 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 27 | 80.46 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 35 | 80.76 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 41 | 81.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 59 | 81.50 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 60 | 81.54 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 2 | 19 |
| 63 | 81.57 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 2 | 17 |
| 64 | 81.61 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 21 |
| 73 | 81.83 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 75 | 81.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 76 | 81.86 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 77 | 81.86 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 85 | 82.01 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 104 | 82.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 106 | 82.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 109 | 82.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 114 | 82.28 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 115 | 82.28 | temperature | 25.0 | 90 | < th | dose independent | rect. | 2 | 7 |
| 117 | 82.28 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 7 |
| 119 | 82.30 | wind | 5.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 127 | 82.39 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 132 | 82.43 | wind | 7.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 140 | 82.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 142 | 82.49 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 147 | 82.52 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 153 | 82.55 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 156 | 82.57 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 159 | 82.59 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 179 | 82.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 191 | 82.78 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 200 | 82.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 203 | 82.82 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 217 | 82.83 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 234 | 82.91 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 242 | 82.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 247 | 82.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 255 | 82.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 258 | 82.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 261 | 82.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 262 | 82.99 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 264 | 82.99 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 267 | 82.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 273 | 83.00 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 276 | 83.00 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 282 | 83.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 312 | 83.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 321 | 83.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 324 | 83.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 359 | 83.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 365 | 83.22 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 17 |
| 368 | 83.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 6 |
| 372 | 83.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 384 | 83.25 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 2 | 17 |
| 387 | 83.26 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 416 | 83.33 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 19 |
| 417 | 83.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 420 | 83.34 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 432 | 83.39 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 2 |
| 475 | 83.51 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 478 | 83.51 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 481 | 83.52 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 482 | 83.52 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 488 | 83.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 493 | 83.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 499 | 83.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 500 | 83.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 505 | 83.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 511 | 83.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 515 | 83.56 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 520 | 83.57 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 539 | 83.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 542 | 83.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 546 | 83.60 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 559 | 83.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 23 |
| 593 | 83.67 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 599 | 83.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 7 |
| 604 | 83.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 616 | 83.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 617 | 83.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 618 | 83.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 633 | 83.71 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 21 |
| 637 | 83.72 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 19 |
| 657 | 83.73 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 15 |
| 661 | 83.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 663 | 83.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 698 | 83.75 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 21 |
| 708 | 83.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 736 | 83.80 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 9 |
| 751 | 83.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 756 | 83.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 761 | 83.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 783 | 83.86 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 785 | 83.86 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 811 | 83.90 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 822 | 83.91 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 18 |
| 827 | 83.91 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 836 | 83.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 848 | 83.94 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 853 | 83.95 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 18 |
| 854 | 83.95 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 3 |
| 871 | 83.98 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 873 | 83.98 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 895 | 84.01 | humidity | 70.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 899 | 84.01 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 904 | 84.02 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 914 | 84.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 991 | 84.10 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 999 | 84.11 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 18 |