Os03g0733400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
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Os03g0733400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, BED-type predicted domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.42 | 0.227 | 12 | 0.811 | 0.182 | -0.547 | -0.368 | 3.34 | 0.263 | 23 | -8.952e-05 | 1433 | -- | -- |
| 24.08 | 0.229 | 12 | 0.707 | 0.189 | 0.371 | -0.365 | -- | 0.281 | 22.8 | 0.06681 | 1425 | -- | -- |
| 23.96 | 0.228 | 12 | 0.828 | 0.187 | -0.571 | -- | 3.41 | 0.264 | 22.6 | -0.07148 | 1392 | -- | -- |
| 24.56 | 0.231 | 12 | 0.729 | 0.182 | 0.367 | -- | -- | 0.275 | 22.6 | 0.2985 | 1424 | -- | -- |
| 26.09 | 0.238 | 12 | 0.821 | -- | -0.464 | -- | 3.05 | 0.267 | -- | -0.7565 | 1404 | -- | -- |
| 25.41 | 0.236 | 12 | 0.786 | 0.182 | -- | -0.342 | -- | 0.26 | 22.9 | -- | -- | -- | -- |
| 25.89 | 0.238 | 12 | 0.801 | 0.185 | -- | -- | -- | 0.262 | 22.5 | -- | -- | -- | -- |
| 26.49 | 0.24 | 12 | 0.731 | -- | 0.344 | -- | -- | 0.278 | -- | 0.4326 | 1720 | -- | -- |
| 32.73 | 0.266 | 12 | -- | 0.175 | 0.572 | -- | -- | 0.27 | 22.9 | 0.5007 | 23895 | -- | -- |
| 27.99 | 0.247 | 12 | 0.804 | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
| 42.8 | 0.306 | 12 | -- | 0.191 | -- | -- | -- | 0.173 | 22.8 | -- | -- | -- | -- |
| 32.36 | 0.265 | 12 | -- | -- | 0.475 | -- | -- | 0.284 | -- | 1.109 | 44834 | -- | -- |
| 45.05 | 0.313 | 12 | -- | -- | -- | -- | -- | 0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.51 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 7 | 22.69 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 9 | 22.71 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 14 | 22.77 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 17 | 22.81 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 27 | 22.97 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 29 | 22.97 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 14 |
| 31 | 22.99 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 41 | 23.03 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 42 | 23.03 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 43 | 23.04 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 44 | 23.04 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 62 | 23.07 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 20 |
| 72 | 23.11 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 80 | 23.12 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 83 | 23.12 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 15 |
| 97 | 23.15 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 100 | 23.15 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 124 | 23.19 | wind | 1.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 151 | 23.23 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 1 | NA |
| 153 | 23.23 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 1 | NA |
| 163 | 23.23 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 193 | 23.27 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 2 | NA |
| 194 | 23.27 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 5 |
| 208 | 23.29 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 219 | 23.30 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 238 | 23.31 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 259 | 23.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 265 | 23.32 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 291 | 23.33 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 294 | 23.34 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 301 | 23.34 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 302 | 23.34 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 20 |
| 313 | 23.35 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 17 |
| 326 | 23.36 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 340 | 23.37 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 343 | 23.37 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 349 | 23.37 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 365 | 23.38 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 377 | 23.38 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 500 | 23.42 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 504 | 23.43 | wind | 3.0 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 516 | 23.43 | precipitation | 0.1 | 1440 | > th | dose dependent | no | NA | NA |
| 517 | 23.43 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 537 | 23.43 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 539 | 23.44 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 549 | 23.44 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 562 | 23.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 569 | 23.45 | precipitation | 0.1 | 1440 | > th | dose independent | no | NA | NA |
| 570 | 23.45 | precipitation | 0.1 | 1440 | < th | dose independent | no | NA | NA |
| 577 | 23.45 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 587 | 23.45 | precipitation | 0.1 | 1440 | < th | dose dependent | no | NA | NA |
| 590 | 23.45 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 602 | 23.46 | wind | 7.0 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 606 | 23.46 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 608 | 23.46 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 613 | 23.46 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 617 | 23.46 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 620 | 23.46 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 630 | 23.46 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 643 | 23.47 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 657 | 23.47 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 660 | 23.47 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 9 | NA |
| 686 | 23.47 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 699 | 23.48 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 702 | 23.48 | temperature | 25.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 750 | 23.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 752 | 23.50 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 767 | 23.50 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 779 | 23.51 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 786 | 23.51 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 798 | 23.52 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 815 | 23.52 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 10 |
| 825 | 23.53 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 7 | NA |
| 827 | 23.53 | wind | 3.0 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 847 | 23.53 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 7 | NA |
| 877 | 23.54 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 14 | 14 |
| 897 | 23.54 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 902 | 23.55 | humidity | 90.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 903 | 23.55 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 7 | NA |
| 906 | 23.55 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 910 | 23.55 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 922 | 23.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 967 | 23.56 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 983 | 23.56 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 18 |
| 986 | 23.56 | wind | 1.0 | 30 | < th | dose dependent | rect. | 7 | 20 |