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Os03g0733000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0186) R2 : 0.243
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.588 (0.0488) R2dC : 0.242 R2C : 0.242
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0253 (0.0392) R2dN8 : 0.000894 R2N8 : 0.000563
σ : 0.352
deviance : 56.49
__
_____
C
peak time of C : 17.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.61 0.328 11.8 -0.776 0.584 -4.13 -0.131 -6.66 -0.133 17.5 14.98 6101 -- --
52.55 0.34 11.9 -0.273 0.583 -1.14 -0.0842 -- -0.0619 17.6 14.9 4944 -- --
48.65 0.325 11.8 -0.774 0.583 -4.11 -- -6.62 -0.133 17.5 14.99 6100 -- --
48.89 0.326 12 -0.491 0.555 -0.873 -- -- -0.122 17.5 15.1 6177 -- --
66.36 0.379 11.8 -0.789 -- -4.02 -- -6.36 -0.152 -- 15 6106 -- --
55.07 0.348 11.9 -0.229 0.585 -- -0.143 -- -0.0501 17.4 -- -- -- --
55.12 0.348 11.9 -0.228 0.584 -- -- -- -0.0508 17.5 -- -- -- --
66.51 0.38 11.9 -0.546 -- -0.988 -- -- -0.142 -- 15 6141 -- --
53.75 0.341 11.9 -- 0.59 -0.739 -- -- -0.0393 17.5 14.4 6103 -- --
72.88 0.399 11.9 -0.248 -- -- -- -- -0.065 -- -- -- -- --
56.49 0.352 11.9 -- 0.588 -- -- -- -0.0253 17.5 -- -- -- --
71.87 0.395 11.9 -- -- -0.678 -- -- -0.0394 -- 14.6 6102 -- --
74.5 0.403 11.9 -- -- -- -- -- -0.0375 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.29 temperature 15.0 270 > th dose independent rect. 8 17
2 43.49 temperature 10.0 90 > th dose dependent rect. 9 18
6 44.01 temperature 15.0 270 > th dose independent rect. 6 21
7 44.04 temperature 10.0 10 > th dose dependent rect. 9 19
21 44.76 temperature 15.0 270 > th dose independent rect. 21 15
32 45.20 temperature 10.0 270 > th dose dependent rect. 19 7
37 45.30 temperature 15.0 90 > th dose dependent rect. 20 18
42 45.42 temperature 10.0 270 > th dose dependent rect. 20 16
56 45.67 precipitation 0.1 1440 < th dose independent rect. 10 3
57 45.67 precipitation 0.1 1440 < th dose dependent rect. 10 3
58 45.70 humidity 90.0 270 < th dose independent rect. 7 7
61 45.76 temperature 15.0 10 > th dose dependent rect. 20 8
82 45.97 temperature 15.0 270 > th dose independent rect. 18 9
88 46.00 temperature 15.0 270 > th dose independent rect. 19 7
97 46.06 wind 9.0 90 < th dose dependent rect. 9 18
128 46.26 temperature 15.0 270 > th dose independent rect. 6 8
129 46.26 radiation 20.0 4320 < th dose independent rect. 21 9
130 46.27 wind 7.0 90 < th dose independent rect. 9 18
131 46.28 humidity 50.0 14400 > th dose independent rect. 4 5
150 46.40 wind 9.0 270 < th dose dependent rect. 7 7
157 46.44 radiation 1.0 270 > th dose independent rect. 6 8
179 46.56 temperature 20.0 90 > th dose independent rect. 9 5
185 46.60 humidity 50.0 90 > th dose dependent rect. 3 16
195 46.64 temperature 15.0 10 > th dose independent rect. 9 19
231 46.83 atmosphere 1010.0 90 < th dose independent rect. 9 18
245 46.88 temperature 15.0 270 > th dose independent rect. 17 22
259 46.94 temperature 10.0 43200 > th dose independent rect. 15 5
262 46.96 humidity 90.0 270 < th dose independent rect. 9 2
270 46.99 precipitation 0.1 90 < th dose independent rect. 3 6
271 46.99 precipitation 0.1 90 < th dose dependent rect. 3 6
272 47.00 atmosphere 1010.0 10 < th dose independent rect. 20 8
275 47.00 wind 9.0 90 < th dose dependent rect. 3 6
280 47.03 temperature 10.0 30 > th dose dependent rect. 9 5
281 47.03 wind 9.0 90 < th dose dependent rect. 9 8
293 47.06 humidity 80.0 43200 > th dose independent rect. 2 12
305 47.09 humidity 90.0 10 < th dose independent rect. 9 7
314 47.13 atmosphere 1010.0 90 < th dose independent rect. 3 6
320 47.14 radiation 30.0 4320 < th dose independent rect. 5 2
327 47.15 wind 7.0 270 < th dose independent rect. 7 7
332 47.16 wind 7.0 90 < th dose independent rect. 3 6
340 47.17 temperature 10.0 90 > th dose dependent rect. 19 23
342 47.18 temperature 10.0 43200 > th dose independent rect. 10 5
343 47.18 temperature 30.0 90 < th dose independent rect. 3 6
348 47.19 temperature 10.0 90 > th dose independent rect. 3 6
351 47.19 humidity 50.0 90 > th dose independent rect. 3 6
353 47.19 atmosphere 995.0 90 > th dose independent rect. 3 6
357 47.20 wind 5.0 270 < th dose dependent rect. 3 3
361 47.21 humidity 80.0 43200 > th dose independent rect. 3 10
366 47.21 temperature 15.0 10 > th dose dependent rect. 20 22
391 47.27 humidity 80.0 43200 > th dose independent rect. 1 14
401 47.30 humidity 60.0 90 > th dose dependent rect. 3 9
404 47.31 humidity 80.0 43200 < th dose independent rect. 2 12
408 47.32 radiation 40.0 90 < th dose independent rect. 3 6
411 47.32 precipitation 0.1 90 < th dose independent rect. 9 18
413 47.32 precipitation 0.1 90 < th dose dependent rect. 9 18
418 47.33 humidity 70.0 43200 > th dose dependent rect. 2 9
426 47.36 radiation 1.0 270 > th dose independent sin 2 NA
427 47.36 humidity 90.0 270 < th dose independent rect. 23 15
433 47.37 humidity 80.0 43200 < th dose independent rect. 1 14
437 47.38 humidity 80.0 43200 > th dose independent sin 4 NA
439 47.38 radiation 40.0 90 < th dose independent rect. 4 15
440 47.38 radiation 40.0 10 < th dose independent rect. 4 16
446 47.40 atmosphere 1010.0 10 < th dose independent rect. 9 19
461 47.43 humidity 90.0 10 < th dose independent rect. 9 9
463 47.43 atmosphere 995.0 90 > th dose independent rect. 9 18
464 47.43 wind 7.0 270 < th dose independent rect. 6 21
479 47.45 humidity 90.0 90 < th dose dependent rect. 9 5
486 47.46 precipitation 0.1 270 < th dose independent rect. 1 7
489 47.46 precipitation 0.1 270 < th dose dependent rect. 1 7
509 47.49 atmosphere 1015.0 1440 < th dose independent rect. 3 7
513 47.50 wind 3.0 270 < th dose independent rect. 3 3
517 47.50 humidity 60.0 10 > th dose independent rect. 4 16
521 47.51 wind 7.0 270 < th dose independent rect. 1 7
532 47.52 atmosphere 1010.0 270 < th dose independent rect. 19 7
537 47.52 humidity 60.0 43200 > th dose dependent rect. 1 14
541 47.53 wind 9.0 1440 < th dose independent rect. 4 6
542 47.53 radiation 30.0 270 < th dose independent rect. 1 7
548 47.54 atmosphere 1015.0 90 < th dose dependent rect. 3 6
555 47.55 humidity 50.0 270 > th dose dependent rect. 2 6
556 47.55 humidity 60.0 43200 > th dose dependent rect. 24 16
558 47.56 precipitation 0.1 270 < th dose independent rect. 3 3
563 47.56 precipitation 0.1 270 < th dose dependent rect. 3 3
569 47.57 radiation 1.0 270 < th dose independent rect. 3 14
586 47.58 wind 7.0 10 < th dose independent rect. 9 19
595 47.60 humidity 80.0 43200 < th dose independent sin 4 NA
601 47.60 radiation 1.0 270 < th dose dependent rect. 3 14
607 47.61 humidity 70.0 43200 > th dose dependent sin 6 NA
614 47.62 temperature 15.0 270 > th dose independent rect. 9 2
620 47.62 humidity 70.0 43200 > th dose dependent rect. 19 18
629 47.63 wind 9.0 90 < th dose dependent rect. 19 8
634 47.64 temperature 10.0 270 > th dose independent rect. 1 7
636 47.64 temperature 30.0 270 < th dose independent rect. 1 7
637 47.64 humidity 50.0 270 > th dose independent rect. 1 7
639 47.64 atmosphere 995.0 270 > th dose independent rect. 1 7
640 47.64 atmosphere 1015.0 270 < th dose independent rect. 1 7
647 47.64 radiation 1.0 270 < th dose dependent rect. 3 8
649 47.65 humidity 80.0 43200 < th dose independent rect. 5 1
658 47.66 humidity 90.0 270 < th dose independent sin 3 NA
660 47.66 wind 7.0 10 < th dose independent rect. 9 5
661 47.66 wind 7.0 90 < th dose independent rect. 9 8
674 47.67 radiation 40.0 270 < th dose dependent rect. 2 6
695 47.69 humidity 80.0 270 > th dose dependent rect. 2 15
701 47.70 radiation 1.0 270 < th dose independent rect. 3 8
702 47.70 radiation 1.0 270 < th dose independent rect. 3 10
707 47.70 humidity 50.0 270 > th dose dependent rect. 3 3
711 47.70 temperature 10.0 10 > th dose dependent rect. 6 23
715 47.71 precipitation 0.1 270 < th dose independent rect. 6 8
719 47.71 humidity 80.0 43200 < th dose dependent rect. 4 2
720 47.71 precipitation 0.1 270 < th dose dependent rect. 6 8
776 47.76 radiation 40.0 90 < th dose independent rect. 3 8
798 47.77 atmosphere 1015.0 270 < th dose dependent rect. 3 3
808 47.78 humidity 80.0 43200 > th dose independent rect. 23 18
817 47.79 humidity 80.0 270 > th dose independent rect. 3 3
819 47.79 wind 7.0 90 < th dose independent rect. 19 9
822 47.79 humidity 60.0 90 > th dose dependent rect. 3 12
841 47.80 wind 9.0 10 < th dose dependent rect. 20 8
866 47.82 precipitation 0.1 270 < th dose independent rect. 14 16
876 47.82 precipitation 0.1 270 < th dose dependent rect. 14 16
883 47.83 wind 9.0 270 < th dose independent rect. 14 16
884 47.83 humidity 50.0 30 > th dose independent rect. 14 19
898 47.84 radiation 40.0 270 < th dose independent rect. 14 16
922 47.86 temperature 10.0 270 > th dose independent rect. 3 3
924 47.86 temperature 30.0 270 < th dose independent rect. 3 3
925 47.86 humidity 50.0 270 > th dose independent rect. 3 3
928 47.86 atmosphere 995.0 270 > th dose independent rect. 3 3
929 47.86 atmosphere 1015.0 270 < th dose independent rect. 3 3
930 47.86 radiation 20.0 270 < th dose independent rect. 3 3
934 47.86 atmosphere 995.0 270 > th dose independent rect. 6 8
935 47.86 atmosphere 1015.0 270 < th dose independent rect. 6 8
937 47.86 temperature 30.0 90 < th dose independent rect. 19 9
938 47.86 humidity 50.0 90 > th dose independent rect. 19 9
940 47.86 atmosphere 995.0 90 > th dose independent rect. 19 9
941 47.86 radiation 1.0 90 < th dose independent rect. 19 9
947 47.86 temperature 10.0 90 > th dose independent rect. 4 15
948 47.86 atmosphere 1015.0 90 < th dose independent rect. 4 15
949 47.86 temperature 10.0 270 > th dose independent rect. 14 16
952 47.86 atmosphere 1015.0 270 < th dose independent rect. 7 19
958 47.86 radiation 1.0 90 < th dose dependent rect. 19 9
973 47.87 wind 9.0 270 < th dose dependent rect. 17 9
986 47.88 wind 1.0 43200 > th dose dependent rect. 1 2
999 47.89 humidity 90.0 14400 > th dose dependent rect. 9 2