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Os03g0731900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.5 (0.0201) R2 : 0.866
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 3.25 (0.0606) R2dE : 0.865 R2E : 0.862
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0423) R2dN8 : 0.0043 R2N8 : 0.000918
σ : 0.377
deviance : 65.64
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.114
memory length : 958
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 5.11
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.12 0.305 14.4 0.085 4.48 3 1.95 1.05 0.143 11.4 1.295 278 6.84 --
43.27 0.306 14.4 0.123 4.5 3.02 0.994 -- 0.146 11.3 1.35 277 6.85 --
45.33 0.314 14.4 0.186 4.28 2.78 -- -0.606 0.16 11.2 0.1092 277 6.96 --
46.93 0.319 14.4 0.197 4.25 2.76 -- -- 0.151 11.2 0.1198 278 6.91 --
60.2 0.361 14.5 0.276 -- 3.29 -- 1.06 0.191 -- 0.5019 884 3.42 --
74.38 0.404 14.5 0.0362 2.72 -- 1.45 -- 0.0643 8.25 -- -- -- --
80.86 0.421 14.5 0.0787 2.72 -- -- -- 0.0633 8.23 -- -- -- --
64.75 0.375 14.5 0.22 -- 3.43 -- -- 0.16 -- 0.6 899 3.89 --
47.93 0.322 14.4 -- 4.26 2.76 -- -- 0.148 11.2 0.12 279 6.91 --
488.56 1.03 14.5 0.0984 -- -- -- -- 0.094 -- -- -- -- --
81.02 0.421 14.5 -- 2.72 -- -- -- 0.0545 8.23 -- -- -- --
65.64 0.377 14.5 -- -- 3.25 -- -- 0.118 -- 1.114 958 5.11 --
488.82 1.03 14.5 -- -- -- -- -- 0.0831 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.11 temperature 10.0 270 > th dose dependent rect. 14 7
3 39.33 temperature 25.0 270 > th dose independent rect. 15 4
11 40.79 temperature 20.0 270 > th dose independent rect. 14 7
21 41.74 wind 9.0 270 < th dose independent rect. 15 17
23 42.11 radiation 40.0 270 < th dose independent rect. 15 17
25 42.24 wind 9.0 270 < th dose independent rect. 14 19
26 42.25 temperature 10.0 270 > th dose independent rect. 8 7
27 42.25 atmosphere 1015.0 270 < th dose independent rect. 8 7
28 42.25 temperature 10.0 270 > th dose independent rect. 15 17
30 42.28 atmosphere 995.0 270 > th dose independent rect. 8 7
32 42.36 radiation 1.0 270 > th dose independent rect. 15 17
35 42.46 wind 9.0 270 < th dose independent rect. 8 7
36 42.51 precipitation 0.1 270 < th dose independent rect. 8 7
37 42.51 precipitation 0.1 270 < th dose dependent rect. 8 7
38 42.56 radiation 1.0 270 > th dose independent rect. 8 7
42 42.62 radiation 1.0 270 < th dose dependent sin 13 NA
46 42.75 temperature 10.0 270 > th dose independent rect. 9 5
47 42.75 atmosphere 995.0 270 > th dose independent rect. 9 5
48 42.75 atmosphere 1015.0 270 < th dose independent rect. 9 5
49 42.75 temperature 10.0 270 > th dose independent rect. 14 19
52 42.86 radiation 1.0 270 > th dose independent rect. 9 5
53 42.87 wind 9.0 270 < th dose independent rect. 9 5
54 42.92 wind 9.0 270 < th dose independent rect. 4 15
55 42.94 precipitation 0.1 270 < th dose independent rect. 9 5
56 42.94 precipitation 0.1 270 < th dose dependent rect. 9 5
57 42.95 radiation 1.0 270 > th dose independent sin 13 NA
59 43.00 precipitation 0.1 270 < th dose independent rect. 15 17
61 43.00 precipitation 0.1 270 < th dose dependent rect. 15 17
62 43.09 radiation 1.0 270 < th dose independent sin 13 NA
66 43.23 humidity 70.0 270 > th dose independent rect. 19 9
73 43.32 temperature 10.0 270 > th dose independent rect. 19 9
74 43.32 temperature 30.0 270 < th dose independent rect. 19 9
76 43.32 atmosphere 995.0 270 > th dose independent rect. 19 9
77 43.32 radiation 1.0 270 < th dose independent rect. 19 9
82 43.32 temperature 10.0 270 > th dose independent rect. 4 15
83 43.32 atmosphere 1015.0 270 < th dose independent rect. 4 15
84 43.32 radiation 10.0 270 < th dose dependent rect. 19 9
94 43.46 wind 9.0 270 < th dose independent rect. 19 9
102 43.59 wind 1.0 270 > th dose independent rect. 9 5
108 43.73 humidity 90.0 270 < th dose independent rect. 15 4
109 43.74 precipitation 0.1 270 < th dose independent rect. 14 19
110 43.74 precipitation 0.1 270 < th dose dependent rect. 14 19
111 43.76 wind 1.0 270 > th dose independent rect. 8 7
113 43.80 temperature 15.0 10 > th dose dependent rect. 16 6
114 43.84 wind 9.0 270 < th dose independent rect. 14 7
116 43.90 precipitation 0.1 270 < th dose independent rect. 4 15
118 43.90 precipitation 0.1 270 < th dose dependent rect. 4 15
132 44.34 temperature 10.0 270 > th dose independent rect. 14 7
133 44.34 temperature 10.0 270 > th dose independent rect. 21 17
134 44.34 atmosphere 995.0 270 > th dose independent rect. 21 17
139 44.51 wind 1.0 270 > th dose independent rect. 14 7
141 44.55 humidity 90.0 270 < th dose independent rect. 9 5
143 44.59 wind 9.0 270 < th dose independent rect. 21 17
149 44.75 precipitation 0.1 270 < th dose independent rect. 14 7
150 44.75 precipitation 0.1 270 < th dose dependent rect. 14 7
152 44.77 precipitation 0.1 270 < th dose independent rect. 19 9
153 44.77 precipitation 0.1 270 < th dose dependent rect. 19 9
157 44.86 precipitation 0.1 270 < th dose independent rect. 21 17
158 44.86 precipitation 0.1 270 < th dose dependent rect. 21 17
164 45.02 radiation 1.0 270 > th dose dependent rect. 16 15
172 45.15 humidity 90.0 270 < th dose independent rect. 14 6
180 45.22 humidity 50.0 270 > th dose independent rect. 9 5
188 45.36 humidity 90.0 270 < th dose independent rect. 16 1
196 45.52 atmosphere 1015.0 270 < th dose independent rect. 14 7
202 45.56 atmosphere 1015.0 270 < th dose independent rect. 21 17
208 45.68 temperature 10.0 270 > th dose dependent rect. 15 17
218 45.84 wind 9.0 270 < th dose independent rect. 15 4
235 45.97 temperature 10.0 270 > th dose dependent rect. 14 19
252 46.15 atmosphere 995.0 270 > th dose independent rect. 15 17
257 46.23 wind 9.0 10 < th dose independent rect. 16 18
259 46.24 radiation 40.0 270 < th dose independent rect. 15 4
265 46.27 humidity 50.0 270 > th dose independent rect. 8 7
285 46.33 radiation 40.0 270 < th dose independent rect. 14 7
288 46.35 atmosphere 995.0 270 > th dose independent rect. 19 20
290 46.39 temperature 10.0 10 > th dose independent rect. 10 6
292 46.39 atmosphere 1015.0 10 < th dose independent rect. 10 6
293 46.39 precipitation 0.1 10 < th dose independent rect. 10 6
294 46.39 temperature 10.0 10 > th dose independent rect. 16 18
295 46.39 precipitation 0.1 10 < th dose dependent rect. 10 6
296 46.40 temperature 10.0 270 > th dose independent rect. 15 4
298 46.40 atmosphere 1010.0 270 < th dose independent rect. 15 4
301 46.40 temperature 10.0 270 > th dose independent rect. 19 20
303 46.42 precipitation 0.1 10 < th dose independent rect. 16 18
304 46.42 precipitation 0.1 10 < th dose dependent rect. 16 18
314 46.47 radiation 1.0 270 > th dose independent rect. 16 2
334 46.58 wind 9.0 10 < th dose independent rect. 10 6
338 46.60 humidity 90.0 270 < th dose independent rect. 10 3
343 46.62 atmosphere 995.0 10 > th dose independent rect. 10 6
345 46.63 temperature 10.0 10 > th dose dependent rect. 16 18
348 46.65 humidity 50.0 270 > th dose independent rect. 21 17
353 46.67 wind 1.0 270 > th dose independent rect. 15 4
363 46.71 temperature 10.0 270 > th dose independent rect. 1 9
364 46.71 atmosphere 995.0 270 > th dose independent rect. 1 9
365 46.71 atmosphere 1015.0 270 < th dose independent rect. 1 9
366 46.71 temperature 10.0 270 > th dose independent rect. 10 15
367 46.73 wind 9.0 270 < th dose independent rect. 1 9
368 46.74 precipitation 0.1 270 < th dose independent rect. 15 4
370 46.74 precipitation 0.1 270 < th dose dependent rect. 15 4
371 46.76 humidity 50.0 270 > th dose independent rect. 1 9
373 46.76 wind 9.0 270 < th dose independent rect. 19 20
414 46.96 wind 1.0 270 > th dose independent rect. 19 9
452 47.09 precipitation 0.1 270 < th dose independent rect. 19 20
453 47.09 precipitation 0.1 270 < th dose dependent rect. 19 20
454 47.11 wind 1.0 30 > th dose independent rect. 10 6
476 47.28 atmosphere 1015.0 270 < th dose dependent rect. 15 4
484 47.31 atmosphere 995.0 10 > th dose independent rect. 16 18
488 47.35 atmosphere 995.0 270 > th dose independent rect. 14 19
492 47.36 temperature 10.0 1440 > th dose independent rect. 11 6
496 47.36 temperature 10.0 1440 > th dose independent rect. 17 18
505 47.40 wind 9.0 270 < th dose independent rect. 2 7
506 47.40 temperature 10.0 270 > th dose independent rect. 2 7
508 47.40 humidity 50.0 270 > th dose independent rect. 2 7
509 47.40 atmosphere 995.0 270 > th dose independent rect. 2 7
510 47.40 atmosphere 1015.0 270 < th dose independent rect. 2 7
512 47.40 temperature 10.0 270 > th dose independent rect. 9 17
523 47.50 radiation 1.0 270 > th dose dependent rect. 15 17
532 47.57 precipitation 0.1 270 < th dose independent rect. 1 9
534 47.57 precipitation 0.1 270 < th dose dependent rect. 1 9
573 47.76 radiation 40.0 270 < th dose independent rect. 2 7
583 47.83 precipitation 0.1 270 < th dose independent rect. 2 7
586 47.83 precipitation 0.1 270 < th dose dependent rect. 2 7
597 47.89 atmosphere 1015.0 270 < th dose independent rect. 19 20
616 48.04 wind 9.0 270 < th dose independent rect. 10 15
618 48.07 temperature 30.0 270 < th dose independent rect. 9 6
619 48.09 humidity 50.0 270 > th dose independent rect. 10 3
629 48.13 temperature 30.0 270 < th dose independent rect. 2 7
650 48.23 temperature 30.0 270 < th dose independent rect. 10 4
684 48.27 wind 9.0 270 < th dose independent rect. 9 17
719 48.43 radiation 1.0 270 > th dose dependent rect. 16 1
724 48.49 wind 9.0 270 < th dose independent rect. 16 1
737 48.58 humidity 50.0 270 > th dose independent rect. 19 20
753 48.65 humidity 50.0 10 > th dose independent rect. 16 18
756 48.67 precipitation 0.1 270 < th dose independent rect. 10 15
757 48.67 precipitation 0.1 270 < th dose dependent rect. 10 15
782 48.78 wind 1.0 270 > th dose independent rect. 21 17
789 48.83 radiation 30.0 270 < th dose independent rect. 16 1
796 48.84 precipitation 0.1 270 < th dose independent rect. 9 17
797 48.84 precipitation 0.1 270 < th dose dependent rect. 9 17
803 48.90 wind 3.0 270 > th dose independent rect. 16 2
805 48.90 atmosphere 1015.0 270 < th dose independent rect. 19 9
817 48.98 atmosphere 995.0 270 > th dose independent rect. 9 17
819 49.00 temperature 10.0 270 > th dose independent rect. 16 1
821 49.00 atmosphere 1010.0 270 < th dose independent rect. 16 1
826 49.00 temperature 10.0 270 > th dose independent rect. 17 23
831 49.02 atmosphere 995.0 270 > th dose independent rect. 14 6
872 49.12 precipitation 0.1 10 < th dose independent rect. 16 5
874 49.12 precipitation 0.1 10 < th dose dependent rect. 16 5
922 49.29 temperature 10.0 270 > th dose dependent rect. 4 16
931 49.34 precipitation 0.1 270 < th dose independent rect. 16 1
939 49.34 precipitation 0.1 270 < th dose dependent rect. 16 1
943 49.36 atmosphere 995.0 270 > th dose independent rect. 15 4
953 49.41 atmosphere 995.0 270 > th dose independent rect. 10 15
968 49.44 wind 9.0 10 < th dose independent rect. 16 5
979 49.48 atmosphere 1015.0 270 < th dose dependent rect. 14 6
986 49.51 atmosphere 1015.0 270 < th dose dependent rect. 16 1