Os03g0730500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os03g0730500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 360.27 | 0.892 | 4.58 | -4.8 | 0.803 | 3.25 | -0.151 | -9.46 | -0.53 | 6.34 | 25.46 | 951 | 6.81 | -- |
| 374.69 | 0.902 | 4.39 | -3.15 | 0.805 | 2.25 | -0.599 | -- | -0.257 | 5.86 | 25.16 | 989 | 7.35 | -- |
| 359.36 | 0.883 | 4.58 | -4.77 | 0.786 | 3.16 | -- | -8.94 | -0.54 | 6.33 | 25.44 | 993 | 7.33 | -- |
| 374.61 | 0.901 | 4.4 | -3.16 | 0.791 | 2.25 | -- | -- | -0.269 | 6.08 | 25 | 991 | 7.93 | -- |
| 380.62 | 0.909 | 4.67 | -4.94 | -- | 3.26 | -- | -7.86 | -0.939 | -- | 23.72 | 1006 | 7.76 | -- |
| 510.23 | 1.06 | 4.37 | -2.66 | 1.32 | -- | -0.25 | -- | -0.137 | 4.42 | -- | -- | -- | -- |
| 510.39 | 1.06 | 4.37 | -2.66 | 1.32 | -- | -- | -- | -0.135 | 4.44 | -- | -- | -- | -- |
| 395.82 | 0.927 | 4.47 | -3.24 | -- | 2.61 | -- | -- | -0.522 | -- | 23.19 | 937 | 7.47 | -- |
| 624.45 | 1.16 | 4.32 | -- | 0.926 | 1.75 | -- | -- | 0.129 | 5.72 | 25.4 | 952 | 7.45 | -- |
| 603.1 | 1.15 | 4.38 | -2.61 | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
| 696.99 | 1.23 | 4.3 | -- | 1.27 | -- | -- | -- | 0.161 | 4.49 | -- | -- | -- | -- |
| 658.23 | 1.19 | 4.36 | -- | -- | 2.02 | -- | -- | -0.0212 | -- | 23.85 | 928 | 7.21 | -- |
| 782.69 | 1.31 | 4.31 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 376.46 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 2 | 378.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 8 | 381.08 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 28 | 384.84 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 45 | 386.52 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 49 | 387.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 86 | 389.68 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 89 | 389.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 127 | 390.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 212 | 393.56 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 225 | 394.02 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 233 | 394.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 263 | 394.57 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 314 | 395.06 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 321 | 395.15 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 337 | 395.54 | temperature | 25 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 340 | 395.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 363 | 396.01 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 367 | 396.08 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 434 | 397.12 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 442 | 397.31 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 482 | 398.10 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 716 | 401.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 730 | 402.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 855 | 403.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 870 | 403.98 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 888 | 404.16 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 891 | 404.18 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 895 | 404.24 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 929 | 404.43 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 22 |
| 932 | 404.46 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 946 | 404.52 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 22 |
| 987 | 404.74 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 991 | 404.75 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 16 |