Os03g0729600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0729600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.58 | 0.68 | 9.8 | 0.749 | 1.82 | 4.6 | -0.131 | 8.28 | -0.702 | 8.66 | 18.9 | 5758 | -- | -- |
| 238.32 | 0.719 | 9.46 | 0.737 | 1.88 | 2.08 | 0.661 | -- | -0.313 | 8.14 | 21.7 | 2683 | -- | -- |
| 209.63 | 0.674 | 9.8 | 0.745 | 1.82 | 4.61 | -- | 8.3 | -0.702 | 8.66 | 18.9 | 5775 | -- | -- |
| 228.71 | 0.704 | 9.51 | 0.733 | 1.78 | 1.85 | -- | -- | -0.451 | 8.31 | 22 | 2324 | -- | -- |
| 384.63 | 0.913 | 9.86 | 0.927 | -- | 5.03 | -- | 8.81 | -0.642 | -- | 18.92 | 6570 | -- | -- |
| 335.73 | 0.859 | 9.62 | -0.161 | 1.8 | -- | -0.0784 | -- | -1.12 | 8.78 | -- | -- | -- | -- |
| 335.75 | 0.858 | 9.62 | -0.164 | 1.8 | -- | -- | -- | -1.12 | 8.77 | -- | -- | -- | -- |
| 384.34 | 0.913 | 9.52 | 0.67 | -- | 1.96 | -- | -- | -0.427 | -- | 22.1 | 2222 | -- | -- |
| 231.54 | 0.709 | 9.5 | -- | 1.7 | 1.59 | -- | -- | -0.59 | 8.53 | 22.46 | 2219 | -- | -- |
| 520.57 | 1.07 | 9.67 | -0.162 | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
| 336.46 | 0.858 | 9.62 | -- | 1.8 | -- | -- | -- | -1.1 | 8.78 | -- | -- | -- | -- |
| 392.12 | 0.922 | 9.54 | -- | -- | 1.75 | -- | -- | -0.538 | -- | 22.5 | 2231 | -- | -- |
| 521.26 | 1.07 | 9.66 | -- | -- | -- | -- | -- | -1.09 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 2 | 203.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 203.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 4 | 204.26 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 7 | 205.09 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 11 | 205.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 18 | 206.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 23 | 206.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 28 | 207.03 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 100 | 209.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 148 | 210.40 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 151 | 210.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 157 | 210.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 160 | 210.66 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 175 | 210.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 182 | 211.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 219 | 211.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 222 | 211.66 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 232 | 211.75 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 241 | 211.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 247 | 211.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 257 | 212.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 258 | 212.01 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 380 | 213.48 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |