Os03g0725300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dbr1-prov protein.
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Os03g0725300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dbr1-prov protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.08 | 0.322 | 7.87 | 0.707 | 1.13 | 0.296 | 0.555 | 0.302 | 0.396 | 18.7 | 70.01 | 2663 | -- | -- |
| 47.23 | 0.32 | 7.87 | 0.726 | 1.15 | 0.309 | 0.54 | -- | 0.411 | 18.7 | 70.11 | 2622 | -- | -- |
| 47.86 | 0.322 | 7.87 | 0.702 | 1.13 | 0.294 | -- | 0.286 | 0.396 | 18.7 | 70 | 2661 | -- | -- |
| 47.71 | 0.322 | 7.86 | 0.741 | 1.13 | 0.327 | -- | -- | 0.416 | 18.7 | 71 | 2649 | -- | -- |
| 114.34 | 0.501 | 7.85 | 0.663 | -- | -0.206 | -- | -0.208 | 0.36 | -- | 70 | 2661 | -- | -- |
| 50.18 | 0.332 | 7.87 | 0.704 | 1.14 | -- | 0.545 | -- | 0.369 | 18.5 | -- | -- | -- | -- |
| 50.92 | 0.334 | 7.87 | 0.696 | 1.14 | -- | -- | -- | 0.371 | 18.5 | -- | -- | -- | -- |
| 113.77 | 0.499 | 7.85 | 0.656 | -- | -0.224 | -- | -- | 0.365 | -- | 71 | 2649 | -- | -- |
| 55.15 | 0.346 | 7.87 | -- | 1.24 | 0.469 | -- | -- | 0.379 | 18.4 | 68 | 29484 | -- | -- |
| 118.44 | 0.509 | 7.85 | 0.668 | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
| 63.68 | 0.373 | 7.89 | -- | 1.13 | -- | -- | -- | 0.294 | 18.6 | -- | -- | -- | -- |
| 118.55 | 0.507 | 7.89 | -- | -- | 0.646 | -- | -- | 0.272 | -- | 64 | 28688 | -- | -- |
| 130.2 | 0.533 | 7.87 | -- | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 4 | 45.80 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 12 | 46.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 13 | 46.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 18 | 46.09 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 19 | 46.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 24 | 46.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 26 | 46.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 30 | 46.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 31 | 46.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 33 | 46.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 35 | 46.19 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 38 | 46.19 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 45 | 46.21 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 50 | 46.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 55 | 46.24 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 58 | 46.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 70 | 46.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 2 |
| 71 | 46.28 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 73 | 46.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 79 | 46.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 81 | 46.30 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 91 | 46.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 92 | 46.30 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 110 | 46.31 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 123 | 46.34 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 24 | 8 |
| 135 | 46.35 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 142 | 46.36 | temperature | 25.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 195 | 46.42 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 196 | 46.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 202 | 46.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 208 | 46.43 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 211 | 46.44 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 212 | 46.44 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 223 | 46.46 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 224 | 46.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 227 | 46.47 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 3 | 3 |
| 230 | 46.47 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 267 | 46.52 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 283 | 46.53 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 295 | 46.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 299 | 46.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 307 | 46.54 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 15 |
| 335 | 46.56 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 338 | 46.57 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 351 | 46.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 355 | 46.58 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 373 | 46.59 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 374 | 46.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 377 | 46.59 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 396 | 46.60 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 397 | 46.60 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 399 | 46.60 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 400 | 46.60 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 409 | 46.61 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 413 | 46.61 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 427 | 46.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 428 | 46.62 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 437 | 46.62 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 449 | 46.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 476 | 46.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 477 | 46.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 481 | 46.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 493 | 46.66 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 1 | 5 |
| 494 | 46.66 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 502 | 46.66 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 503 | 46.66 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 526 | 46.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 528 | 46.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 6 |
| 532 | 46.67 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 557 | 46.68 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 575 | 46.69 | temperature | 25.0 | 720 | < th | dose independent | rect. | 21 | 3 |
| 580 | 46.69 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 20 |
| 581 | 46.69 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 584 | 46.69 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 596 | 46.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 597 | 46.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 16 |
| 609 | 46.70 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 621 | 46.71 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 636 | 46.71 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 640 | 46.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 689 | 46.73 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 713 | 46.74 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 723 | 46.74 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 732 | 46.74 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 733 | 46.75 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 735 | 46.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 756 | 46.76 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 778 | 46.76 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 788 | 46.76 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 796 | 46.77 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 798 | 46.77 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 824 | 46.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 13 |
| 827 | 46.78 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 832 | 46.78 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 845 | 46.79 | humidity | 90.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 847 | 46.79 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 854 | 46.79 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 872 | 46.80 | radiation | 40.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 904 | 46.81 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 917 | 46.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 919 | 46.81 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 930 | 46.81 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 954 | 46.82 | wind | 3.0 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 984 | 46.83 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 7 |
| 991 | 46.83 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 13 | 12 |