Os03g0723800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0723800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.87 | 0.679 | 6.58 | 0.456 | 0.737 | 1.47 | 0.301 | 0.233 | -0.254 | 5.06 | 22.26 | 1468 | -- | -- |
| 208.98 | 0.673 | 6.57 | 0.531 | 0.739 | 1.47 | 0.279 | -- | -0.236 | 5.03 | 22.23 | 1455 | -- | -- |
| 209.03 | 0.673 | 6.58 | 0.453 | 0.742 | 1.47 | -- | 0.232 | -0.256 | 4.92 | 22.27 | 1451 | -- | -- |
| 209.15 | 0.674 | 6.57 | 0.53 | 0.741 | 1.47 | -- | -- | -0.239 | 4.92 | 22.28 | 1455 | -- | -- |
| 234.39 | 0.713 | 6.59 | 0.484 | -- | 1.52 | -- | 0.447 | -0.234 | -- | 21.9 | 1823 | -- | -- |
| 290 | 0.798 | 6.68 | 0.00313 | 0.68 | -- | 0.379 | -- | -0.731 | 5.27 | -- | -- | -- | -- |
| 290.31 | 0.798 | 6.68 | 0.00285 | 0.682 | -- | -- | -- | -0.733 | 5.11 | -- | -- | -- | -- |
| 234.51 | 0.713 | 6.58 | 0.74 | -- | 1.59 | -- | -- | -0.221 | -- | 21.73 | 1835 | -- | -- |
| 213.87 | 0.681 | 6.59 | -- | 0.742 | 1.3 | -- | -- | -0.326 | 3.83 | 22.4 | 960 | -- | -- |
| 314.66 | 0.829 | 6.69 | 0.0271 | -- | -- | -- | -- | -0.715 | -- | -- | -- | -- | -- |
| 290.31 | 0.797 | 6.68 | -- | 0.682 | -- | -- | -- | -0.733 | 5.11 | -- | -- | -- | -- |
| 236.78 | 0.717 | 6.61 | -- | -- | 1.23 | -- | -- | -0.359 | -- | 22.1 | 570 | -- | -- |
| 314.68 | 0.828 | 6.69 | -- | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 4 | 209.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 12 | 209.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 34 | 210.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 39 | 210.79 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 40 | 210.79 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 64 | 211.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 81 | 211.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 85 | 211.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 111 | 212.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 112 | 212.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 115 | 212.75 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 161 | 213.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 179 | 214.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 192 | 214.59 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 269 | 215.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 305 | 215.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 431 | 217.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 514 | 217.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 518 | 217.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 613 | 218.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 640 | 218.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 641 | 218.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 729 | 219.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 755 | 219.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 858 | 220.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 23 |