Os03g0723400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0723400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 512.74 | 1.06 | 8.28 | 1.08 | 0.285 | 4.03 | 0.515 | 4.74 | -0.885 | 7.3 | 24.76 | 2542 | 8.3 | -- |
| 535.06 | 1.08 | 8.15 | 2.02 | 0.205 | 3.67 | 0.43 | -- | -0.647 | 5.99 | 25.2 | 2402 | 6.52 | -- |
| 513.35 | 1.06 | 8.28 | 1.07 | 0.273 | 4.03 | -- | 4.77 | -0.886 | 7.06 | 24.8 | 2513 | 8.31 | -- |
| 535.7 | 1.08 | 8.15 | 2.02 | 0.195 | 3.64 | -- | -- | -0.655 | 5.79 | 25.2 | 2411 | 6.44 | -- |
| 516.19 | 1.06 | 8.29 | 1.05 | -- | 3.97 | -- | 4.71 | -0.894 | -- | 24.9 | 2432 | 8.15 | -- |
| 749.7 | 1.28 | 8.35 | 0.672 | 0.465 | -- | 0.61 | -- | -1.57 | 9.89 | -- | -- | -- | -- |
| 751.13 | 1.28 | 8.35 | 0.696 | 0.462 | -- | -- | -- | -1.56 | 9.96 | -- | -- | -- | -- |
| 536.95 | 1.08 | 8.15 | 2 | -- | 3.61 | -- | -- | -0.657 | -- | 25.25 | 2336 | 6.35 | -- |
| 622.55 | 1.16 | 8.26 | -- | 0.182 | 2.6 | -- | -- | -1.08 | 7.77 | 25.3 | 2275 | 6.25 | -- |
| 763.93 | 1.29 | 8.36 | 0.691 | -- | -- | -- | -- | -1.56 | -- | -- | -- | -- | -- |
| 763.91 | 1.29 | 8.36 | -- | 0.459 | -- | -- | -- | -1.64 | 9.84 | -- | -- | -- | -- |
| 623.78 | 1.16 | 8.24 | -- | -- | 2.69 | -- | -- | -1.06 | -- | 25.4 | 2232 | 5.63 | -- |
| 776.52 | 1.3 | 8.38 | -- | -- | -- | -- | -- | -1.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 508.71 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 511.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 4 | 516.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 6 | 519.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 13 | 522.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 42 | 525.68 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 71 | 527.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 115 | 531.48 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 201 | 535.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 246 | 536.85 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 264 | 537.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 267 | 537.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 294 | 538.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 324 | 538.95 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 338 | 539.33 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 367 | 539.93 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 381 | 540.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 452 | 541.55 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 459 | 541.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 500 | 542.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 506 | 542.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 569 | 542.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 732 | 544.75 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 997 | 547.99 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |