Os03g0722500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
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Os03g0722500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 17 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 356.71 | 0.887 | 7.8 | -1.79 | 1.65 | 3.59 | -0.166 | -3.28 | 0.297 | 17.6 | 19.23 | 1140 | 8.4 | -- |
| 364.84 | 0.89 | 7.71 | -1.04 | 1.68 | 3.57 | 0.441 | -- | 0.505 | 17.5 | 18.42 | 1153 | 8.57 | -- |
| 356.74 | 0.88 | 7.8 | -1.78 | 1.66 | 3.58 | -- | -3.27 | 0.293 | 17.5 | 19.32 | 1137 | 8.38 | -- |
| 365 | 0.89 | 7.71 | -1.04 | 1.74 | 3.6 | -- | -- | 0.501 | 17.7 | 18.3 | 1130 | 8.17 | -- |
| 393.75 | 0.924 | 7.81 | -2.05 | -- | 3.09 | -- | -3.49 | 0.197 | -- | 20.21 | 1609 | 9.56 | -- |
| 625.19 | 1.17 | 7.53 | -0.00925 | 0.633 | -- | -0.898 | -- | 1.23 | 19.2 | -- | -- | -- | -- |
| 626.77 | 1.17 | 7.53 | 0.0136 | 0.645 | -- | -- | -- | 1.23 | 18.7 | -- | -- | -- | -- |
| 398.33 | 0.93 | 7.72 | -1.86 | -- | 4.01 | -- | -- | 0.281 | -- | -3.386 | 7465 | 13.7 | -- |
| 388.13 | 0.918 | 7.67 | -- | 1.54 | 3.05 | -- | -- | 0.671 | 17.7 | 19.6 | 1129 | 7.96 | -- |
| 648.46 | 1.19 | 7.51 | -0.00149 | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
| 626.78 | 1.17 | 7.53 | -- | 0.645 | -- | -- | -- | 1.23 | 18.7 | -- | -- | -- | -- |
| 424.76 | 0.96 | 7.62 | -- | -- | 2.56 | -- | -- | 0.727 | -- | 20.1 | 1608 | 9.76 | -- |
| 648.46 | 1.19 | 7.51 | -- | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 3 | 358.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 38 | 366.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 100 | 370.74 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 122 | 371.95 | temperature | 15 | 720 | > th | dose dependent | sin | 11 | NA |
| 189 | 374.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 190 | 374.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 195 | 374.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 211 | 375.34 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 218 | 375.58 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 262 | 376.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 286 | 377.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 300 | 377.64 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 317 | 377.99 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 326 | 378.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 328 | 378.18 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 333 | 378.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 362 | 378.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 406 | 379.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 445 | 380.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 458 | 380.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 472 | 380.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 668 | 382.88 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 733 | 383.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 759 | 383.87 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 2 |