Os03g0722200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0722200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 646.75 | 1.19 | 4.87 | -1.75 | 0.627 | 2.49 | -1.27 | -1.79 | -1.33 | 23.5 | 27.7 | 4746 | -- | -- |
| 647.14 | 1.18 | 4.84 | -1.25 | 0.595 | 2.37 | -1.24 | -- | -1.22 | 23.5 | 27.9 | 4818 | -- | -- |
| 652.03 | 1.19 | 4.87 | -1.72 | 0.648 | 2.5 | -- | -1.87 | -1.34 | 22.9 | 27.8 | 4792 | -- | -- |
| 652.68 | 1.19 | 4.81 | -1.21 | 0.651 | 2.33 | -- | -- | -1.22 | 22.7 | 27.8 | 4818 | -- | -- |
| 676.02 | 1.21 | 4.83 | -1.55 | -- | 2.53 | -- | -1.39 | -1.27 | -- | 27.9 | 4833 | -- | -- |
| 829.92 | 1.35 | 4.76 | -0.394 | 0.748 | -- | -0.789 | -- | -0.959 | 22.4 | -- | -- | -- | -- |
| 832 | 1.35 | 4.76 | -0.359 | 0.764 | -- | -- | -- | -0.954 | 22 | -- | -- | -- | -- |
| 676.47 | 1.21 | 4.79 | -1.19 | -- | 2.41 | -- | -- | -1.19 | -- | 27.85 | 4847 | -- | -- |
| 685.93 | 1.22 | 4.77 | -- | 0.643 | 2.03 | -- | -- | -1.04 | 22.4 | 27.84 | 4801 | -- | -- |
| 867.06 | 1.38 | 4.73 | -0.35 | -- | -- | -- | -- | -0.954 | -- | -- | -- | -- | -- |
| 835.39 | 1.35 | 4.75 | -- | 0.762 | -- | -- | -- | -0.914 | 21.9 | -- | -- | -- | -- |
| 705.76 | 1.24 | 4.74 | -- | -- | 2.08 | -- | -- | -0.992 | -- | 28.7 | 4845 | -- | -- |
| 870.29 | 1.38 | 4.73 | -- | -- | -- | -- | -- | -0.915 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 598.62 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 10 | 606.19 | humidity | 70 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 17 | 606.85 | humidity | 70 | 14400 | > th | dose dependent | rect. | 11 | 12 |
| 18 | 606.87 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 20 | 607.03 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 31 | 607.45 | humidity | 70 | 14400 | > th | dose dependent | sin | 19 | NA |
| 49 | 608.20 | humidity | 80 | 14400 | < th | dose independent | rect. | 7 | 14 |
| 50 | 608.21 | humidity | 70 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 69 | 608.68 | humidity | 70 | 14400 | > th | dose dependent | rect. | 6 | 17 |
| 151 | 610.54 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 172 | 610.95 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 174 | 610.98 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 240 | 612.21 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 251 | 612.37 | humidity | 80 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 256 | 612.50 | humidity | 60 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 280 | 612.82 | humidity | 80 | 14400 | < th | dose independent | sin | 21 | NA |
| 290 | 612.98 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 307 | 613.16 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 356 | 613.78 | humidity | 70 | 14400 | > th | dose dependent | no | NA | NA |
| 375 | 614.00 | humidity | 70 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 384 | 614.16 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 386 | 614.18 | humidity | 70 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 392 | 614.29 | humidity | 70 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 478 | 615.28 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 689 | 617.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 728 | 618.09 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 870 | 619.48 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 894 | 619.63 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |