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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0719000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MAP65/ASE1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.31 (0.062) R2 : 0.791
β1 : -2.52 (0.227) R2dD : 0.0614 R2D : 0.0338
β2 : 4.05 (0.179) R2dC : 0.319 R2C : 0.538
β3 : -2.55 (0.168) R2dE : 0.154 R2E : 0.392
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.16 (0.133) R2dN8 : 0.0451 R2N8 : 0.0314
σ : 1.16
deviance : 617.99
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_____
C
peak time of C : 9.47
E
wheather : humidity
threshold : 72
memory length : 792
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.4
open length of G : 3.33

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
615.27 1.17 7.31 -2.54 3.92 -2.73 -0.399 -1.41 -1.19 9.48 71.31 806 15.8 3.7
620.05 1.16 7.32 -2.65 3.91 -2.75 0.578 -- -1.19 9.45 71.39 806 15.9 3.63
615.4 1.16 7.32 -2.56 3.92 -2.72 -- -1.16 -1.18 9.47 71.47 807 15.9 3.65
617.99 1.16 7.31 -2.52 4.05 -2.55 -- -- -1.16 9.47 72 792 16.4 3.33
829.2 1.34 7.41 -2.51 -- -4.64 -- 0.278 -0.925 -- 49.04 787 14 4.5
852.94 1.37 7.33 -2.45 5.48 -- 0.672 -- -1.37 10.4 -- -- -- --
854.78 1.37 7.33 -2.42 5.48 -- -- -- -1.37 10.4 -- -- -- --
778.28 1.3 7.39 -2.88 -- -5.1 -- -- -0.942 -- 51.17 797 13.3 5.52
790.25 1.31 7.31 -- 4.04 -2.59 -- -- -0.896 9.51 73 783 16.6 3.24
2689.06 2.42 7.47 -2.51 -- -- -- -- -1.38 -- -- -- -- --
1009.36 1.49 7.27 -- 5.49 -- -- -- -1.1 10.4 -- -- -- --
997.83 1.47 7.33 -- -- -5.01 -- -- -0.719 -- 52 784 13.5 5.51
2855.58 2.49 7.41 -- -- -- -- -- -1.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 639.33 humidity 70 720 > th dose independent rect. 16 4
4 645.73 humidity 70 720 > th dose independent rect. 16 12
8 647.99 humidity 70 1440 > th dose independent sin 15 NA
15 650.65 radiation 30 1440 < th dose independent rect. 15 17
19 651.51 humidity 70 1440 > th dose independent rect. 11 21
21 651.67 humidity 70 1440 > th dose independent rect. 11 11
28 651.80 humidity 70 1440 > th dose independent rect. 11 15
33 652.58 humidity 50 1440 > th dose dependent rect. 12 1
51 653.45 humidity 80 1440 < th dose dependent rect. 11 10
52 653.67 humidity 80 1440 < th dose dependent rect. 11 22
58 654.39 humidity 70 1440 < th dose independent sin 16 NA
90 656.41 radiation 30 1440 < th dose independent rect. 15 7
96 656.58 radiation 10 1440 > th dose independent rect. 11 22
103 656.95 temperature 30 720 < th dose independent rect. 16 4
104 656.98 humidity 80 1440 < th dose dependent sin 18 NA
112 657.36 radiation 10 1440 > th dose independent sin 13 NA
113 657.36 humidity 70 1440 > th dose independent rect. 16 22
118 657.57 humidity 50 1440 > th dose dependent rect. 11 10
121 657.67 radiation 30 1440 > th dose independent rect. 15 17
123 657.70 radiation 30 1440 < th dose independent rect. 15 3
127 657.81 humidity 70 1440 < th dose independent rect. 11 20
129 657.84 humidity 70 1440 < th dose independent rect. 11 9
150 658.17 humidity 50 720 > th dose dependent rect. 15 6
175 658.57 radiation 30 1440 < th dose independent rect. 15 11
188 658.69 humidity 80 1440 < th dose dependent rect. 7 14
220 658.98 humidity 80 1440 < th dose dependent rect. 15 23
241 659.35 radiation 20 1440 > th dose dependent rect. 15 17
245 659.45 radiation 10 1440 > th dose independent rect. 15 23
344 660.64 humidity 80 1440 < th dose dependent no NA NA
359 660.89 humidity 90 1440 < th dose dependent rect. 12 1
375 661.16 radiation 10 1440 > th dose independent rect. 15 16
388 661.23 radiation 10 1440 > th dose independent rect. 8 23
405 661.65 humidity 70 1440 > th dose independent rect. 3 19
407 661.65 humidity 70 1440 > th dose independent rect. 1 21
447 661.76 humidity 70 1440 > th dose independent no NA NA
499 661.97 humidity 90 1440 < th dose dependent rect. 11 3
504 662.03 temperature 30 720 < th dose independent rect. 15 13
508 662.17 temperature 30 1440 < th dose independent rect. 11 1
537 662.73 radiation 30 1440 > th dose independent rect. 15 2
576 663.15 radiation 30 1440 > th dose dependent rect. 15 2
591 663.24 humidity 70 1440 < th dose independent rect. 15 4
622 663.73 humidity 80 1440 < th dose dependent rect. 15 6
660 664.15 humidity 70 1440 < th dose independent rect. 16 22
673 664.33 humidity 50 1440 > th dose dependent sin 21 NA
688 664.61 temperature 30 1440 > th dose dependent rect. 14 1
698 664.77 temperature 30 1440 > th dose dependent rect. 11 5
736 665.39 radiation 10 1440 > th dose independent no NA NA
737 665.39 radiation 10 1440 > th dose independent rect. 5 13
829 665.81 temperature 30 1440 > th dose independent rect. 11 1
906 666.69 temperature 30 1440 < th dose independent rect. 9 3
936 666.81 humidity 60 720 > th dose dependent rect. 18 1
951 667.10 temperature 30 1440 > th dose dependent sin 1 NA
952 667.11 radiation 40 1440 < th dose dependent rect. 15 3
968 667.31 radiation 40 1440 < th dose dependent rect. 15 7