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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0715600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : EF-Hand type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.0321) R2 : 0.0014
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0541 (0.0676) R2dN8 : 0.00181 R2N8 : 0.0014
σ : 0.604
deviance : 167.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
138.52 0.553 3.03 0.363 0.224 0.962 1.15 -1.37 0.205 7.75 25.16 741 -- --
139.6 0.55 3.07 0.149 0.239 1.29 0.871 -- 0.106 7.78 22.34 719 -- --
141.3 0.554 3.05 0.28 0.237 1.05 -- -0.66 0.17 8.6 23.55 782 -- --
141.27 0.554 3.07 0.163 0.25 1.25 -- -- 0.103 9.05 22.39 682 -- --
143.38 0.558 3.04 0.328 -- 1.12 -- -0.974 0.216 -- 28.58 688 -- --
158.06 0.589 3.11 -0.173 0.373 -- 0.578 -- -0.0741 8.83 -- -- -- --
159.03 0.591 3.11 -0.151 0.37 -- -- -- -0.0725 9.36 -- -- -- --
144.59 0.56 3.06 0.171 -- 1.15 -- -- 0.182 -- 27.09 680 -- --
141.75 0.555 3.08 -- 0.272 1.15 -- -- 0.0908 9.41 22.78 559 -- --
167.04 0.604 3.12 -0.153 -- -- -- -- -0.0711 -- -- -- -- --
159.64 0.591 3.1 -- 0.37 -- -- -- -0.0557 9.39 -- -- -- --
145.28 0.561 3.07 -- -- 1.08 -- -- 0.15 -- 27.14 678 -- --
167.66 0.604 3.11 -- -- -- -- -- -0.0541 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.26 temperature 25 720 < th dose dependent rect. 24 20
6 136.45 temperature 30 720 < th dose dependent rect. 21 19
89 137.37 temperature 30 270 < th dose dependent rect. 7 18
91 137.39 temperature 30 270 < th dose dependent rect. 7 16
103 137.46 temperature 25 270 < th dose dependent rect. 8 1
110 137.51 temperature 25 720 < th dose dependent sin 2 NA
145 137.78 temperature 30 720 < th dose dependent rect. 15 21
264 138.52 temperature 10 720 > th dose dependent rect. 18 17
271 138.55 temperature 25 720 < th dose dependent no NA NA
303 138.78 temperature 30 90 < th dose dependent rect. 10 17
319 138.87 temperature 10 720 > th dose dependent sin 9 NA
327 138.91 temperature 25 720 < th dose dependent rect. 4 23
342 138.96 temperature 25 270 < th dose dependent rect. 7 4
369 139.06 temperature 10 720 > th dose dependent rect. 12 23
394 139.19 temperature 25 270 < th dose dependent rect. 7 9
448 139.41 temperature 10 720 > th dose dependent rect. 22 16
489 139.58 temperature 30 10 < th dose dependent rect. 11 15
528 139.71 temperature 30 90 < th dose dependent rect. 10 1
565 139.81 temperature 10 720 > th dose dependent rect. 9 23
594 139.95 temperature 10 720 > th dose dependent rect. 7 23
612 140.00 temperature 10 720 > th dose dependent rect. 1 23
632 140.05 temperature 10 720 > th dose dependent no NA NA
645 140.10 temperature 20 720 < th dose dependent rect. 1 9
713 140.28 temperature 15 720 > th dose dependent rect. 22 23
821 140.63 atmosphere 1000 14400 < th dose independent rect. 4 1
842 140.68 temperature 15 720 > th dose dependent rect. 20 23
985 141.08 temperature 25 1440 < th dose dependent rect. 7 3
996 141.11 temperature 25 1440 < th dose dependent rect. 8 1
997 141.11 temperature 15 720 > th dose dependent rect. 1 20