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Os03g0712900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.04 (0.026) R2 : 0.426
β1 : 0.341 (0.121) R2dD : 0.0184 R2D : -0.113
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.995 (0.0751) R2dE : 0.266 R2E : 0.24
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -2.84 (0.281) R2dD*E : 0.233 R2D*E : 0.193
γ1 : 0.261 (0.0598) R2dN8 : 0.041 R2N8 : -0.0692
σ : 0.458
deviance : 96.5
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C
peak time of C : --
E
wheather : temperature
threshold : 21.8
memory length : 894
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 5.1
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.49 0.437 9.04 0.311 0.417 1.05 0.446 -2.65 0.261 2.41 21.8 895 4.21 --
101.66 0.47 9.12 -0.33 0.367 1.16 1.12 -- 0.02 1.51 20.8 811 3.67 --
87.07 0.435 9.03 0.338 0.428 1.06 -- -2.79 0.278 2.22 21.82 894 3.94 --
106.1 0.48 9.11 -0.367 0.396 1.21 -- -- 0.053 2.59 20.9 858 4.09 --
96.5 0.458 9.04 0.341 -- 0.995 -- -2.84 0.261 -- 21.8 894 5.1 --
141.87 0.558 9.17 -0.669 0.0774 -- 1.55 -- -0.212 0.176 -- -- -- --
146.05 0.566 9.17 -0.74 0.354 -- -- -- -0.227 5.36 -- -- -- --
113.32 0.496 9.12 -0.416 -- 1.19 -- -- 0.0317 -- 20.9 745 4.86 --
109.7 0.488 9.11 -- 0.407 1.28 -- -- 0.112 2.61 20.8 895 4.25 --
152.57 0.577 9.17 -0.728 -- -- -- -- -0.218 -- -- -- -- --
160.47 0.593 9.15 -- 0.342 -- -- -- -0.145 5.45 -- -- -- --
117.59 0.505 9.1 -- -- 1.29 -- -- 0.0968 -- 20.82 753 4.74 --
166.54 0.602 9.16 -- -- -- -- -- -0.138 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 88.90 temperature 20 720 > th dose dependent rect. 21 12
3 89.40 temperature 20 270 > th dose dependent rect. 4 5
31 94.44 temperature 20 720 > th dose dependent sin 8 NA
33 94.69 temperature 20 720 < th dose independent rect. 3 2
42 95.25 temperature 30 720 < th dose dependent rect. 1 4
50 95.81 temperature 20 720 < th dose independent rect. 1 5
56 96.36 temperature 10 720 > th dose dependent rect. 21 12
66 97.02 temperature 25 720 < th dose dependent rect. 23 7
69 97.13 temperature 25 720 < th dose dependent rect. 3 2
79 97.43 temperature 20 720 > th dose independent rect. 4 3
80 97.43 temperature 20 10 > th dose dependent sin 5 NA
87 97.59 temperature 25 720 < th dose dependent rect. 21 10
119 98.23 temperature 30 90 < th dose dependent rect. 1 15
142 98.75 temperature 25 270 < th dose independent rect. 22 15
148 98.87 temperature 25 720 < th dose dependent sin 10 NA
155 99.01 temperature 30 270 < th dose dependent rect. 23 16
189 99.71 temperature 25 10 > th dose dependent sin 8 NA
194 99.76 temperature 20 720 > th dose independent rect. 21 12
203 99.91 temperature 25 90 > th dose independent rect. 6 5
210 100.02 temperature 20 720 > th dose independent rect. 23 8
216 100.07 temperature 30 10 < th dose dependent sin 6 NA
248 100.65 temperature 25 270 > th dose independent rect. 6 3
307 101.50 humidity 90 43200 > th dose independent rect. 22 1
308 101.50 humidity 90 43200 > th dose independent rect. 20 4
325 101.67 temperature 20 720 < th dose independent sin 9 NA
328 101.67 humidity 90 43200 > th dose independent rect. 17 8
350 101.85 humidity 90 43200 > th dose independent rect. 15 11
368 101.92 humidity 90 43200 > th dose independent rect. 12 14
375 102.00 humidity 90 43200 < th dose independent rect. 21 2
382 102.06 humidity 90 43200 < th dose independent rect. 17 8
388 102.11 humidity 90 43200 > th dose independent rect. 11 16
394 102.15 humidity 90 43200 > th dose independent sin 16 NA
395 102.16 humidity 90 43200 < th dose independent rect. 14 11
414 102.27 humidity 90 43200 < th dose independent rect. 13 13
417 102.29 radiation 40 43200 < th dose independent rect. 16 15
427 102.35 humidity 90 43200 < th dose independent rect. 20 4
436 102.39 humidity 90 43200 < th dose independent rect. 10 17
437 102.40 humidity 90 43200 < th dose independent sin 16 NA
455 102.53 humidity 90 43200 > th dose independent rect. 8 22
505 102.77 humidity 90 43200 > th dose independent rect. 14 22
509 102.78 humidity 90 43200 > th dose independent rect. 19 22
542 102.86 humidity 90 43200 > th dose independent rect. 5 23
558 102.90 humidity 90 43200 > th dose independent no NA NA
621 103.06 humidity 80 43200 > th dose dependent rect. 9 17
622 103.07 temperature 20 720 > th dose independent rect. 21 19
663 103.23 humidity 90 43200 > th dose dependent rect. 10 21
678 103.28 humidity 90 43200 > th dose dependent rect. 22 19
706 103.34 humidity 90 43200 > th dose dependent rect. 19 6
727 103.37 humidity 90 43200 < th dose independent rect. 5 23
733 103.39 humidity 90 43200 < th dose independent rect. 14 23
753 103.41 humidity 90 43200 < th dose independent rect. 16 23
787 103.45 humidity 90 43200 < th dose independent no NA NA
796 103.46 humidity 90 43200 > th dose dependent no NA NA
818 103.50 humidity 90 43200 > th dose dependent sin 16 NA
819 103.50 humidity 90 43200 > th dose dependent rect. 16 10
823 103.51 temperature 25 90 > th dose independent sin 5 NA
837 103.52 humidity 90 43200 > th dose dependent rect. 13 13
844 103.52 humidity 90 43200 > th dose dependent rect. 5 23
874 103.57 humidity 90 43200 < th dose independent rect. 21 23
875 103.57 humidity 90 43200 > th dose dependent rect. 21 3
884 103.58 humidity 90 43200 > th dose dependent rect. 22 1
896 103.60 temperature 25 90 < th dose independent rect. 1 15
911 103.63 temperature 20 720 > th dose independent sin 8 NA
913 103.63 humidity 90 43200 < th dose independent rect. 2 23
923 103.64 humidity 90 43200 > th dose dependent rect. 3 23