Os03g0710800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 14-3-3-like protein S94.
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Os03g0710800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 14-3-3-like protein S94.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.97 | 0.182 | 14.5 | 0.00861 | 0.549 | -0.071 | 0.0719 | -1.62 | 0.0357 | 3.92 | 19.08 | 937 | -- | -- |
| 16.09 | 0.187 | 14.5 | 0.394 | 0.408 | -0.325 | -0.188 | -- | 0.131 | 3.83 | 25.87 | 279 | -- | -- |
| 14.97 | 0.18 | 14.5 | 0.0507 | 0.536 | -0.0962 | -- | -1.58 | 0.0489 | 3.86 | 18.42 | 796 | -- | -- |
| 16.17 | 0.187 | 14.5 | 0.406 | 0.416 | -0.315 | -- | -- | 0.129 | 3.83 | 25.93 | 272 | -- | -- |
| 21.96 | 0.218 | 14.4 | 0.504 | -- | -0.682 | -- | 0.263 | 0.199 | -- | 24.52 | 194 | -- | -- |
| 17.85 | 0.198 | 14.5 | 0.357 | 0.545 | -- | -0.0339 | -- | 0.116 | 4.1 | -- | -- | -- | -- |
| 17.86 | 0.198 | 14.5 | 0.357 | 0.545 | -- | -- | -- | 0.116 | 4.11 | -- | -- | -- | -- |
| 21.98 | 0.218 | 14.5 | 0.482 | -- | -0.665 | -- | -- | 0.188 | -- | 24.47 | 194 | -- | -- |
| 20.33 | 0.21 | 14.5 | -- | 0.465 | -0.224 | -- | -- | 0.0777 | 3.92 | 26.4 | 280 | -- | -- |
| 33.99 | 0.272 | 14.5 | 0.379 | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
| 21.21 | 0.215 | 14.5 | -- | 0.552 | -- | -- | -- | 0.0761 | 4.1 | -- | -- | -- | -- |
| 27.95 | 0.246 | 14.5 | -- | -- | -0.597 | -- | -- | 0.124 | -- | 24.72 | 198 | -- | -- |
| 37.78 | 0.287 | 14.5 | -- | -- | -- | -- | -- | 0.0883 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.37 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 7 |
| 2 | 14.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 14 | 14.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 17 | 14.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 34 | 14.88 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |
| 35 | 14.89 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 14 |
| 54 | 14.98 | temperature | 20 | 270 | > th | dose independent | sin | 12 | NA |
| 55 | 14.98 | temperature | 15 | 10 | > th | dose dependent | sin | 10 | NA |
| 65 | 15.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 72 | 15.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 73 | 15.02 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 74 | 15.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 75 | 15.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 98 | 15.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 22 |
| 116 | 15.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 120 | 15.08 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 129 | 15.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 153 | 15.10 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 156 | 15.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 172 | 15.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 195 | 15.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 202 | 15.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 254 | 15.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 22 |
| 260 | 15.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 265 | 15.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 310 | 15.19 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 337 | 15.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 349 | 15.21 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 358 | 15.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 379 | 15.22 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 11 |
| 382 | 15.22 | temperature | 20 | 1440 | > th | dose dependent | sin | 4 | NA |
| 397 | 15.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 531 | 15.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 681 | 15.28 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 688 | 15.28 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 934 | 15.31 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 994 | 15.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |