Os03g0710700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0710700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 372.02 | 0.906 | 3.26 | 0.804 | 0.415 | -1.76 | 1.47 | -0.549 | 0.0601 | 19.6 | 10.09 | 702 | -- | -- |
| 372.22 | 0.899 | 3.24 | 0.896 | 0.42 | -1.77 | 1.37 | -- | 0.086 | 19.5 | 9.863 | 690 | -- | -- |
| 376.91 | 0.904 | 3.23 | 0.978 | 0.382 | -1.61 | -- | 0.647 | 0.116 | 19.9 | 16.1 | 743 | -- | -- |
| 377.25 | 0.905 | 3.24 | 0.853 | 0.363 | -1.59 | -- | -- | 0.0797 | 20.1 | 16 | 764 | -- | -- |
| 379.47 | 0.907 | 3.25 | 0.733 | -- | -1.41 | -- | -0.635 | 0.0416 | -- | 14.72 | 1450 | -- | -- |
| 411.09 | 0.951 | 3.29 | 0.449 | 0.00861 | -- | -1.1 | -- | -0.186 | 7.77 | -- | -- | -- | -- |
| 414.12 | 0.953 | 3.29 | 0.424 | 0.0888 | -- | -- | -- | -0.182 | 13.7 | -- | -- | -- | -- |
| 379.72 | 0.908 | 3.23 | 0.905 | -- | -1.37 | -- | -- | 0.0828 | -- | 12.97 | 2140 | -- | -- |
| 394.02 | 0.93 | 3.26 | -- | 0.517 | -1.39 | -- | -- | -0.0463 | 14.2 | 16.54 | 703 | -- | -- |
| 414.6 | 0.951 | 3.29 | 0.421 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 418.86 | 0.957 | 3.3 | -- | 0.0811 | -- | -- | -- | -0.23 | 13.6 | -- | -- | -- | -- |
| 395.01 | 0.926 | 3.27 | -- | -- | -0.817 | -- | -- | -0.0711 | -- | 20.9 | 1561 | -- | -- |
| 419.27 | 0.956 | 3.3 | -- | -- | -- | -- | -- | -0.231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 2 | 358.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 7 | 359.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 8 | 360.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 10 | 360.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 14 | 360.35 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 16 | 360.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 17 | 360.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 18 | 360.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 19 | 360.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 28 | 361.54 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 33 | 361.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 34 | 362.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 36 | 362.19 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 37 | 362.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 55 | 363.26 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 82 | 364.21 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 89 | 364.46 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 7 | 9 |
| 97 | 364.61 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 7 | 8 |
| 104 | 364.79 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 105 | 364.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 106 | 364.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 108 | 364.89 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 111 | 364.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 135 | 365.41 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 137 | 365.44 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 141 | 365.58 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 149 | 365.72 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 152 | 365.76 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 160 | 365.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 163 | 365.91 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 186 | 366.10 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 332 | 367.32 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 333 | 367.34 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 375 | 367.63 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 429 | 367.97 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 438 | 368.03 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 539 | 368.56 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 557 | 368.68 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 575 | 368.74 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 602 | 368.89 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 605 | 368.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 629 | 369.04 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 651 | 369.09 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 671 | 369.16 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 687 | 369.22 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 691 | 369.26 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 709 | 369.31 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 713 | 369.33 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 738 | 369.41 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 773 | 369.52 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 815 | 369.65 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 835 | 369.71 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 900 | 369.89 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 932 | 369.97 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 952 | 370.02 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 962 | 370.03 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 991 | 370.09 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 3 |