Os03g0709200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os03g0709200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 205.69 | 0.674 | 4.34 | -0.205 | 0.233 | -1.31 | -0.541 | 0.448 | -0.0306 | 2.1 | 30.9 | 1853 | -- | -- |
| 205.8 | 0.668 | 4.33 | -0.112 | 0.233 | -1.32 | -0.54 | -- | -0.0294 | 2.05 | 29.54 | 1853 | -- | -- |
| 206.77 | 0.67 | 4.34 | -0.184 | 0.234 | -1.3 | -- | 0.424 | -0.0301 | 1.77 | 30.63 | 1852 | -- | -- |
| 206.87 | 0.67 | 4.33 | -0.0934 | 0.232 | -1.31 | -- | -- | -0.0261 | 1.75 | 29.4 | 1852 | -- | -- |
| 208.13 | 0.672 | 4.34 | -0.202 | -- | -1.24 | -- | 0.272 | -0.0503 | -- | 29.24 | 2358 | -- | -- |
| 235.19 | 0.719 | 4.26 | 0.338 | 0.246 | -- | -0.44 | -- | 0.277 | 0.909 | -- | -- | -- | -- |
| 235.95 | 0.719 | 4.26 | 0.355 | 0.247 | -- | -- | -- | 0.28 | 0.429 | -- | -- | -- | -- |
| 207.69 | 0.671 | 4.34 | -0.0439 | -- | -1.43 | -- | -- | -0.0357 | -- | 29.78 | 1109 | -- | -- |
| 207.07 | 0.67 | 4.32 | -- | 0.232 | -1.27 | -- | -- | -0.00514 | 1.68 | 29.57 | 1844 | -- | -- |
| 239.8 | 0.724 | 4.26 | 0.364 | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
| 239.28 | 0.724 | 4.27 | -- | 0.253 | -- | -- | -- | 0.24 | 0.501 | -- | -- | -- | -- |
| 207.71 | 0.671 | 4.33 | -- | -- | -1.39 | -- | -- | -0.015 | -- | 29.5 | 1110 | -- | -- |
| 243.28 | 0.728 | 4.27 | -- | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 2 | 202.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 26 | 203.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 27 | 203.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 35 | 203.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 44 | 203.97 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 22 |
| 64 | 204.39 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 67 | 204.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 79 | 204.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 87 | 204.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 91 | 204.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 98 | 204.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 119 | 204.90 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 11 |
| 130 | 204.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 11 |
| 155 | 205.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 185 | 205.15 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 15 |
| 234 | 205.32 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 249 | 205.35 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 257 | 205.37 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 344 | 205.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 469 | 205.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 470 | 205.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 521 | 205.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 21 |
| 541 | 205.80 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 575 | 205.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 620 | 205.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 661 | 205.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 730 | 206.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 869 | 206.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 21 |