Os03g0708800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0708800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.58 | 0.264 | 11.4 | 1.13 | 1.18 | -0.285 | 0.0903 | 1.84 | 0.143 | 7.31 | 21.33 | 3209 | -- | -- |
| 33.29 | 0.269 | 11.4 | 1.02 | 1.2 | -0.75 | 0.326 | -- | 0.132 | 7.41 | 16.6 | 24185 | -- | -- |
| 31.6 | 0.262 | 11.4 | 1.13 | 1.18 | -0.285 | -- | 1.84 | 0.143 | 7.3 | 21.32 | 3197 | -- | -- |
| 32.25 | 0.264 | 11.4 | 1.18 | 1.18 | -0.884 | -- | -- | 0.108 | 7.33 | 14.4 | 47520 | -- | -- |
| 104.85 | 0.477 | 11.4 | 1.25 | -- | -0.385 | -- | 1.78 | 0.21 | -- | 21.6 | 3529 | -- | -- |
| 43.12 | 0.308 | 11.5 | 0.417 | 1.18 | -- | 0.1 | -- | -0.113 | 7.36 | -- | -- | -- | -- |
| 43.15 | 0.308 | 11.5 | 0.419 | 1.18 | -- | -- | -- | -0.114 | 7.36 | -- | -- | -- | -- |
| 105.82 | 0.479 | 11.5 | 1.22 | -- | -0.907 | -- | -- | 0.129 | -- | 14.46 | 47520 | -- | -- |
| 47.44 | 0.321 | 11.5 | -- | 1.18 | -0.103 | -- | -- | -0.146 | 7.33 | 13.5 | 47520 | -- | -- |
| 117.08 | 0.506 | 11.5 | 0.439 | -- | -- | -- | -- | -0.0941 | -- | -- | -- | -- | -- |
| 47.78 | 0.323 | 11.5 | -- | 1.18 | -- | -- | -- | -0.16 | 7.33 | -- | -- | -- | -- |
| 121.86 | 0.514 | 11.5 | -- | -- | -0.0973 | -- | -- | -0.13 | -- | 13.15 | 47520 | -- | -- |
| 122.16 | 0.516 | 11.5 | -- | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.50 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 2 | 29.51 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 3 | 29.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 5 | 29.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 9 | 29.59 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 12 | 29.61 | humidity | 90 | 14400 | > th | dose dependent | sin | 6 | NA |
| 13 | 29.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 18 | 29.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 17 |
| 19 | 29.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 21 | 29.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 22 | 29.63 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 16 |
| 49 | 29.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 12 |
| 182 | 29.89 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 267 | 30.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 275 | 30.07 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 290 | 30.08 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 313 | 30.13 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 326 | 30.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 334 | 30.18 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 335 | 30.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 343 | 30.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 409 | 30.39 | humidity | 90 | 14400 | < th | dose independent | sin | 11 | NA |
| 451 | 30.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 452 | 30.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 476 | 30.53 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 493 | 30.57 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 594 | 30.78 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 610 | 30.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 653 | 30.90 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 690 | 30.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 696 | 30.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 732 | 31.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 761 | 31.15 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 786 | 31.19 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 789 | 31.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 799 | 31.21 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 825 | 31.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 9 |
| 826 | 31.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 836 | 31.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 843 | 31.27 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 850 | 31.27 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 878 | 31.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 13 |
| 881 | 31.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 21 |
| 899 | 31.31 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 914 | 31.33 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 919 | 31.33 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 923 | 31.33 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 10 |
| 925 | 31.34 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 931 | 31.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 8 |
| 945 | 31.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 949 | 31.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 958 | 31.36 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 968 | 31.36 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 994 | 31.39 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |