Os03g0707200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0707200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF6, transmembrane domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.27 | 0.333 | 12.9 | -0.354 | 1.86 | -0.826 | 0.905 | 2.09 | -0.169 | 7.13 | 25.3 | 861 | -- | -- |
| 51.34 | 0.334 | 12.9 | -0.706 | 1.97 | -0.595 | 0.953 | -- | -0.213 | 7.28 | 24.68 | 1918 | -- | -- |
| 52.26 | 0.337 | 12.9 | -0.439 | 1.89 | -0.76 | -- | 1.41 | -0.188 | 7.09 | 25.2 | 871 | -- | -- |
| 52.71 | 0.338 | 12.9 | -0.699 | 1.98 | -0.568 | -- | -- | -0.252 | 7.26 | 25.31 | 1989 | -- | -- |
| 154.33 | 0.579 | 12.9 | 0.0194 | -- | -2.38 | -- | 3.14 | 0.0463 | -- | 24.63 | 567 | -- | -- |
| 60.42 | 0.364 | 13 | -0.884 | 2.06 | -- | 0.836 | -- | -0.304 | 7.31 | -- | -- | -- | -- |
| 62.31 | 0.37 | 13 | -0.866 | 2.07 | -- | -- | -- | -0.306 | 7.31 | -- | -- | -- | -- |
| 159.81 | 0.589 | 13 | -0.436 | -- | -2.12 | -- | -- | -0.08 | -- | 24.5 | 556 | -- | -- |
| 55.42 | 0.347 | 12.9 | -- | 2.1 | -0.759 | -- | -- | 0.0157 | 7.14 | 19 | 24412 | -- | -- |
| 288.82 | 0.794 | 13 | -0.83 | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
| 82.06 | 0.424 | 12.9 | -- | 2.06 | -- | -- | -- | -0.21 | 7.34 | -- | -- | -- | -- |
| 164.62 | 0.598 | 12.9 | -- | -- | -2.19 | -- | -- | -0.0253 | -- | 24.47 | 563 | -- | -- |
| 307 | 0.818 | 13 | -- | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.06 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 4 | 48.79 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 5 | 48.82 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 13 |
| 6 | 48.99 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 10 |
| 8 | 49.09 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 10 | 49.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 21 |
| 12 | 49.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 17 | 49.30 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 18 | 49.37 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 11 |
| 19 | 49.42 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 38 | 49.75 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 16 | 12 |
| 39 | 49.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 41 | 49.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 42 | 49.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 45 | 49.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 51 | 49.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 63 | 49.97 | radiation | 10.0 | 720 | > th | dose independent | rect. | 15 | 17 |
| 66 | 49.99 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 67 | 49.99 | temperature | 25.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 69 | 50.00 | radiation | 1.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 76 | 50.07 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 90 | 50.13 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 92 | 50.14 | radiation | 20.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 96 | 50.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 97 | 50.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 112 | 50.27 | radiation | 40.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 121 | 50.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 131 | 50.39 | temperature | 25.0 | 30 | > th | dose independent | rect. | 16 | 9 |
| 149 | 50.47 | radiation | 1.0 | 720 | > th | dose independent | sin | 13 | NA |
| 153 | 50.48 | wind | 1.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 160 | 50.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 161 | 50.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 165 | 50.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 167 | 50.53 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 170 | 50.54 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 185 | 50.55 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 203 | 50.57 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 216 | 50.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 234 | 50.62 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 252 | 50.66 | temperature | 25.0 | 270 | > th | dose dependent | sin | 13 | NA |
| 274 | 50.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 306 | 50.80 | temperature | 25.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 332 | 50.85 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 333 | 50.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 370 | 50.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 429 | 50.96 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 4 |
| 472 | 51.00 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 505 | 51.05 | radiation | 1.0 | 720 | < th | dose independent | sin | 12 | NA |
| 535 | 51.06 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 12 | 22 |
| 547 | 51.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 548 | 51.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 554 | 51.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 559 | 51.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 562 | 51.10 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 570 | 51.11 | radiation | 20.0 | 270 | < th | dose independent | sin | 12 | NA |
| 571 | 51.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 620 | 51.17 | radiation | 10.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 631 | 51.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 632 | 51.18 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 636 | 51.18 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 645 | 51.19 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 663 | 51.21 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 675 | 51.22 | humidity | 50.0 | 720 | > th | dose independent | rect. | 17 | 14 |
| 682 | 51.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 684 | 51.23 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 706 | 51.25 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 744 | 51.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 745 | 51.29 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 17 |
| 755 | 51.30 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 760 | 51.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 786 | 51.32 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 791 | 51.33 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 799 | 51.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 800 | 51.34 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 801 | 51.34 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 813 | 51.35 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 815 | 51.35 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 817 | 51.35 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 830 | 51.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 10 |
| 844 | 51.37 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 855 | 51.38 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 871 | 51.39 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 15 |
| 874 | 51.39 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 908 | 51.40 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 928 | 51.41 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 952 | 51.42 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 954 | 51.42 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 966 | 51.42 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 972 | 51.43 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 976 | 51.43 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 997 | 51.44 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 998 | 51.44 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 2 | 10 |