Os03g0702800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic release factor 1) (TB3-1) (Cl1 protein).
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Os03g0702800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic release factor 1) (TB3-1) (Cl1 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.23 | 0.25 | 10.7 | 0.00543 | 0.694 | -0.594 | -0.454 | -1.25 | 0.0251 | 4.75 | 19.87 | 3959 | -- | -- |
| 29.54 | 0.253 | 10.7 | -0.0772 | 0.698 | -0.334 | -0.367 | -- | -0.00672 | 4.71 | 24.7 | 3156 | -- | -- |
| 28.76 | 0.25 | 10.7 | 0.00261 | 0.694 | -0.597 | -- | -1.21 | 0.0262 | 4.74 | 19.78 | 3799 | -- | -- |
| 29.97 | 0.255 | 10.7 | -0.0797 | 0.699 | -0.325 | -- | -- | -0.0107 | 4.71 | 24.75 | 3167 | -- | -- |
| 53.95 | 0.342 | 10.7 | -0.0147 | -- | -0.649 | -- | -1.2 | 0.0423 | -- | 19.6 | 3969 | -- | -- |
| 32.09 | 0.266 | 10.7 | 0.0362 | 0.708 | -- | -0.412 | -- | 0.0735 | 4.66 | -- | -- | -- | -- |
| 32.54 | 0.267 | 10.7 | 0.0384 | 0.705 | -- | -- | -- | 0.0756 | 4.63 | -- | -- | -- | -- |
| 53.08 | 0.339 | 10.7 | -0.059 | -- | -0.422 | -- | -- | -0.0354 | -- | 24.4 | 2725 | -- | -- |
| 30.12 | 0.256 | 10.7 | -- | 0.701 | -0.299 | -- | -- | 0.00215 | 4.69 | 24.8 | 3182 | -- | -- |
| 58.99 | 0.359 | 10.7 | 0.0654 | -- | -- | -- | -- | 0.0941 | -- | -- | -- | -- | -- |
| 32.57 | 0.267 | 10.7 | -- | 0.706 | -- | -- | -- | 0.0713 | 4.63 | -- | -- | -- | -- |
| 53.28 | 0.34 | 10.7 | -- | -- | -0.421 | -- | -- | -0.0302 | -- | 24.49 | 2728 | -- | -- |
| 59.1 | 0.359 | 10.7 | -- | -- | -- | -- | -- | 0.0868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.38 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 2 | 27.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 4 | 27.50 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 6 | 27.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 7 | 27.61 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 18 |
| 13 | 27.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 17 | 27.80 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 18 | 27.81 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 19 | 27.81 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 6 |
| 21 | 27.82 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 22 | 27.82 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 27 | 27.83 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 46 | 27.86 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 83 | 27.90 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 92 | 27.91 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 95 | 27.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 9 |
| 104 | 27.92 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 131 | 27.94 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 139 | 27.94 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 161 | 27.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 11 |
| 193 | 27.97 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 222 | 27.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 13 |
| 261 | 28.02 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 273 | 28.04 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 289 | 28.05 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 328 | 28.07 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 12 |
| 346 | 28.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 354 | 28.09 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 11 |
| 371 | 28.10 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 381 | 28.11 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 413 | 28.13 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 452 | 28.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 508 | 28.18 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 509 | 28.18 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 510 | 28.18 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 513 | 28.18 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 11 | 8 |
| 523 | 28.18 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 11 | 15 |
| 562 | 28.19 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 583 | 28.20 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 585 | 28.20 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 595 | 28.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 619 | 28.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 622 | 28.22 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 625 | 28.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 631 | 28.22 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 6 |
| 641 | 28.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 667 | 28.23 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 668 | 28.23 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 669 | 28.23 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 670 | 28.23 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 693 | 28.23 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 694 | 28.24 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 767 | 28.25 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 5 |
| 809 | 28.26 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 830 | 28.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 879 | 28.28 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 891 | 28.28 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 893 | 28.28 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 946 | 28.29 | temperature | 20.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 976 | 28.29 | radiation | 40.0 | 14400 | > th | dose dependent | no | NA | NA |
| 977 | 28.29 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 986 | 28.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 998 | 28.29 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 11 | 8 |