Os03g0701800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol-4-phosphate 5-kinase family protein.
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Os03g0701800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol-4-phosphate 5-kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.02 | 0.235 | 11.1 | -0.783 | 1.59 | 0.643 | -0.965 | -1.06 | 0.185 | 12.7 | 28.05 | 1171 | -- | -- |
| 25.16 | 0.234 | 11.1 | -0.578 | 1.59 | 0.545 | -0.942 | -- | 0.197 | 12.7 | 27.62 | 1165 | -- | -- |
| 28.9 | 0.25 | 11.1 | -0.743 | 1.59 | 0.614 | -- | -0.583 | 0.177 | 12.7 | 27.78 | 1163 | -- | -- |
| 28.87 | 0.25 | 11.1 | -0.619 | 1.59 | 0.557 | -- | -- | 0.204 | 12.7 | 27.9 | 1161 | -- | -- |
| 144.98 | 0.564 | 11.2 | -0.987 | -- | 1.59 | -- | -3.84 | 0.0672 | -- | 26.7 | 1704 | -- | -- |
| 36.84 | 0.285 | 11.1 | -0.422 | 1.49 | -- | -1.08 | -- | 0.18 | 12.8 | -- | -- | -- | -- |
| 41.73 | 0.303 | 11.1 | -0.463 | 1.49 | -- | -- | -- | 0.174 | 12.7 | -- | -- | -- | -- |
| 144.55 | 0.562 | 11.1 | -0.679 | -- | 1.31 | -- | -- | 0.113 | -- | 26.17 | 4746 | -- | -- |
| 38.05 | 0.287 | 11.1 | -- | 1.55 | 0.429 | -- | -- | 0.301 | 12.8 | 30.78 | 1171 | -- | -- |
| 181 | 0.629 | 11.1 | -0.516 | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
| 47.37 | 0.322 | 11.1 | -- | 1.5 | -- | -- | -- | 0.226 | 12.7 | -- | -- | -- | -- |
| 156.47 | 0.584 | 11.1 | -- | -- | 1.21 | -- | -- | 0.19 | -- | 26.17 | 4746 | -- | -- |
| 188.03 | 0.64 | 11.1 | -- | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 3 | 25.89 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 6 | 26.01 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 7 | 26.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 8 | 26.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 9 | 26.06 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 10 | 26.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 12 | 26.10 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 18 | 26.13 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 27 | 26.13 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 41 | 26.18 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 100 | 26.27 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 248 | 26.42 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 397 | 26.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 408 | 26.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 414 | 26.52 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 14 |
| 415 | 26.52 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 430 | 26.54 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 463 | 26.57 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 490 | 26.62 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 555 | 26.68 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 568 | 26.69 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 599 | 26.70 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 695 | 26.76 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 730 | 26.82 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 733 | 26.83 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 9 |
| 793 | 26.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 820 | 27.00 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 16 |
| 831 | 27.01 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 837 | 27.03 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 844 | 27.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 860 | 27.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 866 | 27.06 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 870 | 27.07 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 871 | 27.07 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 896 | 27.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 923 | 27.10 | humidity | 60 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 948 | 27.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 985 | 27.15 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 986 | 27.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 990 | 27.15 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 992 | 27.15 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 17 |