Os03g0701300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0701300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.81 | 0.539 | 4.85 | 0.832 | 0.482 | -0.931 | 0.171 | 1.41 | -0.261 | 16.4 | 27.65 | 1058 | -- | -- |
| 131.4 | 0.534 | 4.86 | 0.615 | 0.46 | -0.819 | 0.052 | -- | -0.228 | 16.1 | 26.15 | 1060 | -- | -- |
| 131.3 | 0.534 | 4.85 | 0.754 | 0.478 | -0.874 | -- | 0.878 | -0.205 | 16.4 | 26.31 | 1045 | -- | -- |
| 131.25 | 0.534 | 4.87 | 0.604 | 0.477 | -0.861 | -- | -- | -0.226 | 16.6 | 25.82 | 1046 | -- | -- |
| 141.98 | 0.555 | 4.82 | 0.805 | -- | -0.935 | -- | 0.856 | -0.175 | -- | 25.96 | 1145 | -- | -- |
| 153.47 | 0.581 | 4.87 | 0.367 | 0.532 | -- | 0.257 | -- | -0.27 | 15.2 | -- | -- | -- | -- |
| 153.69 | 0.581 | 4.87 | 0.372 | 0.533 | -- | -- | -- | -0.269 | 15.2 | -- | -- | -- | -- |
| 141.61 | 0.554 | 4.86 | 0.609 | -- | -0.857 | -- | -- | -0.228 | -- | 25.87 | 1165 | -- | -- |
| 140.14 | 0.551 | 4.88 | -- | 0.472 | -0.715 | -- | -- | -0.318 | 16.4 | 26.5 | 1046 | -- | -- |
| 169.8 | 0.609 | 4.87 | 0.35 | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
| 157.34 | 0.587 | 4.88 | -- | 0.526 | -- | -- | -- | -0.31 | 15.2 | -- | -- | -- | -- |
| 150.76 | 0.572 | 4.88 | -- | -- | -0.73 | -- | -- | -0.316 | -- | 26.43 | 1162 | -- | -- |
| 173.03 | 0.614 | 4.88 | -- | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 4 | 128.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 7 | 129.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 13 | 129.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 64 | 130.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 67 | 130.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 93 | 131.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 95 | 131.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 96 | 131.34 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 102 | 131.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 158 | 131.85 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 172 | 131.98 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 185 | 132.05 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 228 | 132.23 | radiation | 40 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 243 | 132.33 | humidity | 50 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 255 | 132.37 | temperature | 25 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 265 | 132.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 17 |
| 266 | 132.45 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 267 | 132.45 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 5 |
| 287 | 132.49 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 14 |
| 294 | 132.52 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 299 | 132.54 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 314 | 132.58 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 333 | 132.59 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 337 | 132.60 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 340 | 132.61 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 371 | 132.67 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 419 | 132.92 | temperature | 25 | 270 | < th | dose independent | rect. | 14 | 10 |
| 422 | 132.92 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 433 | 132.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 459 | 132.95 | radiation | 30 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 486 | 132.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 5 |
| 510 | 133.01 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 512 | 133.01 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 513 | 133.02 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 10 |
| 520 | 133.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 524 | 133.05 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 530 | 133.06 | temperature | 15 | 90 | > th | dose dependent | sin | 15 | NA |
| 537 | 133.08 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 557 | 133.11 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 559 | 133.11 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 570 | 133.16 | radiation | 40 | 1440 | > th | dose dependent | sin | 12 | NA |
| 574 | 133.17 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 589 | 133.17 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 594 | 133.18 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 621 | 133.27 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 623 | 133.28 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 637 | 133.29 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 651 | 133.30 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 666 | 133.33 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 681 | 133.35 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 697 | 133.40 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 702 | 133.41 | radiation | 40 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 706 | 133.43 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 741 | 133.48 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 769 | 133.51 | radiation | 30 | 4320 | < th | dose dependent | rect. | 16 | 16 |
| 771 | 133.52 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 783 | 133.55 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 788 | 133.56 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 802 | 133.60 | radiation | 10 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 810 | 133.62 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 834 | 133.67 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 851 | 133.68 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 854 | 133.69 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 858 | 133.70 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 887 | 133.72 | radiation | 40 | 1440 | > th | dose independent | sin | 12 | NA |
| 977 | 133.84 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |