Os03g0700600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0700600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.07 | 0.402 | 2.79 | -0.176 | 0.00849 | 0.329 | 0.363 | -2.06 | 0.0324 | 14.1 | 7.531 | 825 | -- | -- |
| 73.29 | 0.399 | 2.8 | -0.147 | 0.0101 | 0.764 | 0.43 | -- | 0.0376 | 14.1 | 7.799 | 791 | -- | -- |
| 73.53 | 0.399 | 2.79 | -0.158 | 0.00954 | 0.318 | -- | -2.23 | 0.0366 | 13.5 | 7.5 | 829 | -- | -- |
| 73.87 | 0.4 | 2.81 | -0.135 | 0.0181 | 0.804 | -- | -- | 0.0277 | 10.2 | 7.945 | 791 | -- | -- |
| 73.54 | 0.399 | 2.79 | -0.17 | -- | 0.262 | -- | -2.46 | 0.0368 | -- | 7.5 | 829 | -- | -- |
| 76.43 | 0.41 | 2.82 | -0.25 | 0.0107 | -- | -0.446 | -- | -0.0115 | 1.03 | -- | -- | -- | -- |
| 77.25 | 0.412 | 2.82 | -0.234 | 0.0144 | -- | -- | -- | -0.00893 | 22.3 | -- | -- | -- | -- |
| 73.89 | 0.4 | 2.81 | -0.144 | -- | 0.797 | -- | -- | 0.0276 | -- | 8 | 791 | -- | -- |
| 74.38 | 0.402 | 2.8 | -- | 0.0289 | 0.872 | -- | -- | 0.0519 | 9.67 | 7.834 | 834 | -- | -- |
| 77.27 | 0.411 | 2.81 | -0.234 | -- | -- | -- | -- | -0.00888 | -- | -- | -- | -- | -- |
| 78.7 | 0.415 | 2.81 | -- | 0.0138 | -- | -- | -- | 0.0171 | 21.1 | -- | -- | -- | -- |
| 74.38 | 0.402 | 2.8 | -- | -- | 0.851 | -- | -- | 0.0477 | -- | 7.5 | 834 | -- | -- |
| 78.71 | 0.414 | 2.81 | -- | -- | -- | -- | -- | 0.017 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.43 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 67.44 | wind | 9.0 | 270 | > th | dose independent | rect. | 22 | 1 |
| 15 | 67.44 | wind | 9.0 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 108 | 68.63 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 112 | 68.65 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 140 | 68.72 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 143 | 68.72 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 159 | 69.20 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 175 | 69.39 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 184 | 69.83 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 195 | 70.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 344 | 71.28 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 11 |
| 345 | 71.28 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 411 | 71.65 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 432 | 71.74 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 444 | 71.82 | temperature | 15.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 446 | 71.85 | wind | 5.0 | 270 | > th | dose dependent | rect. | 20 | 4 |
| 495 | 72.16 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 510 | 72.20 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 20 | 10 |
| 513 | 72.21 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 524 | 72.21 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 608 | 72.47 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 623 | 72.56 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 630 | 72.57 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 660 | 72.66 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 692 | 72.74 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 695 | 72.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 700 | 72.75 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 725 | 72.81 | wind | 5.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 744 | 72.86 | radiation | 10.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 753 | 72.90 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 755 | 72.90 | temperature | 15.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 756 | 72.90 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 763 | 72.91 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 765 | 72.92 | wind | 7.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 766 | 72.92 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 784 | 72.95 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 19 |
| 785 | 72.96 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 790 | 72.97 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 796 | 72.98 | temperature | 10.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 797 | 72.98 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 798 | 72.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 801 | 72.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 802 | 72.98 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 807 | 72.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 811 | 72.98 | wind | 7.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 814 | 72.98 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 819 | 72.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 821 | 72.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 824 | 72.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 828 | 72.99 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 838 | 72.99 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 839 | 72.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 862 | 72.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 865 | 72.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 873 | 73.00 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 875 | 73.00 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 879 | 73.02 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 884 | 73.03 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 902 | 73.05 | wind | 7.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 904 | 73.05 | wind | 7.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 905 | 73.05 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 922 | 73.09 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 926 | 73.11 | wind | 9.0 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 935 | 73.12 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 11 |
| 937 | 73.13 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 938 | 73.13 | wind | 1.0 | 720 | > th | dose dependent | rect. | 11 | 7 |
| 941 | 73.14 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 955 | 73.16 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 958 | 73.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 966 | 73.17 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 14 | 2 |
| 971 | 73.19 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 2 |
| 979 | 73.20 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 982 | 73.21 | wind | 9.0 | 270 | < th | dose independent | sin | 11 | NA |
| 987 | 73.21 | wind | 1.0 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 1000 | 73.23 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 7 |