Os03g0700200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0700200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.32 | 0.64 | 2.94 | -0.0738 | 0.3 | -0.491 | -1.22 | 1.37 | -0.0192 | 23.1 | 20 | 12 | -- | -- |
| 187.16 | 0.642 | 2.93 | -0.0728 | 0.193 | -0.416 | 0.182 | -- | -0.00928 | 21.8 | 27.74 | 8 | -- | -- |
| 186.74 | 0.641 | 2.93 | -0.0572 | 0.245 | -0.422 | -- | 0.407 | -0.00511 | 22 | 20 | 12 | -- | -- |
| 187.2 | 0.641 | 2.93 | -0.0789 | 0.216 | -0.412 | -- | -- | -0.0102 | 21.9 | 23.5 | 8 | -- | -- |
| 187.83 | 0.638 | 2.93 | -0.0543 | -- | -0.276 | -- | 0.392 | -0.0119 | -- | 24.21 | 11 | -- | -- |
| 190.76 | 0.647 | 2.92 | -0.0544 | 0.239 | -- | -0.0597 | -- | -0.00526 | 13.8 | -- | -- | -- | -- |
| 190.78 | 0.647 | 2.92 | -0.0563 | 0.239 | -- | -- | -- | -0.00559 | 13.8 | -- | -- | -- | -- |
| 188.34 | 0.642 | 2.93 | -0.0744 | -- | -0.294 | -- | -- | -0.0104 | -- | 29.4 | 8 | -- | -- |
| 187.36 | 0.641 | 2.93 | -- | 0.211 | -0.407 | -- | -- | -0.00134 | 21.8 | 23.5 | 8 | -- | -- |
| 194.24 | 0.651 | 2.93 | -0.0661 | -- | -- | -- | -- | -0.011 | -- | -- | -- | -- | -- |
| 190.86 | 0.646 | 2.92 | -- | 0.24 | -- | -- | -- | 0.000679 | 13.8 | -- | -- | -- | -- |
| 188.48 | 0.642 | 2.92 | -- | -- | -0.293 | -- | -- | -0.00216 | -- | 29.4 | 8 | -- | -- |
| 194.35 | 0.651 | 2.92 | -- | -- | -- | -- | -- | -0.00372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.59 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 17 | 173.41 | radiation | 30.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 176 | 177.51 | humidity | 60.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 177 | 177.69 | wind | 1.0 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 179 | 177.74 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 197 | 177.82 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 217 | 178.05 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 269 | 178.22 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 270 | 178.23 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 378 | 178.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 8 | 3 |
| 379 | 178.91 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 381 | 178.99 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 383 | 179.04 | wind | 5.0 | 90 | < th | dose independent | rect. | 13 | 22 |
| 384 | 179.05 | wind | 3.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 389 | 179.08 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 445 | 179.33 | humidity | 60.0 | 10 | < th | dose independent | sin | 13 | NA |
| 446 | 179.33 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 6 |
| 451 | 179.49 | wind | 7.0 | 90 | > th | dose independent | rect. | 19 | 14 |
| 453 | 179.52 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 485 | 179.63 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 553 | 179.96 | humidity | 60.0 | 10 | > th | dose independent | sin | 12 | NA |
| 555 | 179.96 | humidity | 60.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 556 | 180.00 | wind | 3.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 562 | 180.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 563 | 180.12 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 23 |
| 564 | 180.12 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 568 | 180.19 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 592 | 180.27 | wind | 7.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 613 | 180.34 | radiation | 10.0 | 10 | > th | dose independent | rect. | 15 | 20 |
| 652 | 180.59 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 658 | 180.64 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 4 |
| 680 | 180.75 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 716 | 180.95 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 773 | 181.19 | wind | 3.0 | 90 | > th | dose independent | rect. | 10 | 9 |
| 775 | 181.25 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 806 | 181.50 | wind | 5.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 867 | 181.74 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 877 | 181.80 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 891 | 181.90 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 893 | 181.94 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 914 | 181.99 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 915 | 181.99 | radiation | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 932 | 182.02 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 941 | 182.10 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 942 | 182.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 944 | 182.10 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 945 | 182.10 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 946 | 182.10 | radiation | 1.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 947 | 182.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 1 |
| 950 | 182.10 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 951 | 182.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 967 | 182.11 | humidity | 80.0 | 10 | < th | dose independent | rect. | 12 | 1 |