Os03g0699100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0699100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WD40-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 363.75 | 0.896 | 3.02 | 0.211 | 0.229 | 0.225 | -1.01 | 3.43 | 0.029 | 2.8 | 49.54 | 4946 | -- | -- |
| 363.1 | 0.887 | 3.07 | 0.0418 | 0.209 | 1.23 | -1.09 | -- | 0.0428 | 2.46 | 45.18 | 7832 | -- | -- |
| 367.15 | 0.892 | 3.02 | 0.23 | 0.227 | 0.222 | -- | 3.39 | 0.0339 | 2.17 | 49 | 4939 | -- | -- |
| 367.61 | 0.893 | 3.07 | 0.0952 | 0.215 | 1.18 | -- | -- | 0.0431 | 1.66 | 44.96 | 7861 | -- | -- |
| 370.24 | 0.896 | 3.02 | 0.254 | -- | 0.126 | -- | 3.64 | 0.0386 | -- | 49.34 | 4939 | -- | -- |
| 389.54 | 0.925 | 3.09 | 0.493 | 0.208 | -- | -1.12 | -- | -0.00662 | 3.23 | -- | -- | -- | -- |
| 393 | 0.928 | 3.08 | 0.515 | 0.219 | -- | -- | -- | 0.000726 | 1.36 | -- | -- | -- | -- |
| 370.4 | 0.896 | 3.07 | 0.104 | -- | 1.18 | -- | -- | 0.0491 | -- | 44.89 | 7846 | -- | -- |
| 367.82 | 0.893 | 3.08 | -- | 0.214 | 1.22 | -- | -- | 0.0375 | 1.64 | 44.98 | 7832 | -- | -- |
| 395.94 | 0.93 | 3.08 | 0.524 | -- | -- | -- | -- | 0.0053 | -- | -- | -- | -- | -- |
| 399.99 | 0.936 | 3.1 | -- | 0.228 | -- | -- | -- | -0.0566 | 1.44 | -- | -- | -- | -- |
| 370.64 | 0.897 | 3.07 | -- | -- | 1.22 | -- | -- | 0.0403 | -- | 44.72 | 7834 | -- | -- |
| 403.18 | 0.937 | 3.09 | -- | -- | -- | -- | -- | -0.0528 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 359.71 | wind | 1 | 90 | < th | dose independent | rect. | 20 | 1 |
| 4 | 362.53 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 6 | 362.62 | wind | 1 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 16 | 363.28 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 18 | 363.64 | humidity | 50 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 19 | 363.67 | humidity | 50 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 27 | 364.03 | humidity | 50 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 29 | 364.04 | humidity | 50 | 4320 | > th | dose independent | rect. | 12 | 17 |
| 30 | 364.04 | humidity | 50 | 4320 | > th | dose independent | rect. | 12 | 21 |
| 32 | 364.06 | humidity | 50 | 4320 | > th | dose independent | rect. | 12 | 12 |
| 39 | 364.09 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 49 | 364.18 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 54 | 364.31 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 59 | 364.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 69 | 364.51 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 85 | 364.60 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 93 | 364.63 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 12 | 4 |
| 107 | 364.66 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 146 | 364.72 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 21 |
| 177 | 364.79 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 10 | 14 |
| 203 | 364.93 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 10 | 14 |
| 204 | 364.93 | humidity | 60 | 4320 | < th | dose dependent | rect. | 11 | 5 |
| 219 | 364.99 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 10 | 14 |
| 344 | 365.47 | humidity | 50 | 4320 | > th | dose independent | rect. | 4 | 12 |
| 357 | 365.52 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 362 | 365.52 | humidity | 50 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 408 | 365.60 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 20 | NA |
| 439 | 365.65 | humidity | 50 | 4320 | < th | dose dependent | sin | 13 | NA |
| 444 | 365.69 | humidity | 50 | 4320 | > th | dose independent | sin | 18 | NA |
| 445 | 365.69 | humidity | 50 | 4320 | < th | dose independent | sin | 19 | NA |
| 447 | 365.69 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 487 | 365.74 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 20 | NA |
| 570 | 366.05 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 598 | 366.11 | humidity | 50 | 4320 | < th | dose independent | no | NA | NA |
| 732 | 366.18 | humidity | 60 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 776 | 366.26 | wind | 1 | 90 | < th | dose independent | rect. | 14 | 8 |
| 850 | 366.44 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 19 | NA |
| 891 | 366.50 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 900 | 366.52 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 924 | 366.58 | humidity | 50 | 4320 | > th | dose independent | rect. | 3 | 19 |
| 949 | 366.63 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 13 |
| 958 | 366.63 | humidity | 50 | 4320 | > th | dose independent | rect. | 23 | 22 |
| 973 | 366.64 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 21 |
| 997 | 366.66 | humidity | 50 | 4320 | > th | dose independent | no | NA | NA |