FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0699000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Oleosin 18 kDa (OSE721).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.12 (0.0333) R2 : 0.261
β1 : -0.967 (0.122) R2dD : 0.105 R2D : 0.0707
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.13 (0.407) R2dE : 0.284 R2E : 0.00292
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.36 (1.07) R2dD*E : 0.129 R2D*E : -0.097
γ1 : -0.167 (0.0711) R2dN8 : 0.0123 R2N8 : 0.00246
σ : 0.621
deviance : 178
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 0.8076
memory length : 6
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8
open length of G : 20.3

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
174 0.62 3.12 -0.935 0.215 4.07 -0.618 -7.41 -0.174 12.1 0.8663 7 8.25 20.1
193.09 0.647 3.11 -0.996 0.224 2.47 -0.279 -- -0.21 9.5 0.8722 6 8.37 19.9
175.05 0.616 3.12 -0.932 0.208 4.18 -- -7.28 -0.177 10.9 0.8218 6 8 20.3
192.96 0.647 3.1 -1 0.238 2.4 -- -- -0.195 10.2 0.8906 6 8.38 19.9
178 0.621 3.12 -0.967 -- 4.13 -- -7.36 -0.167 -- 0.8076 6 8 20.3
215.58 0.688 3.11 -0.881 0.17 -- -0.536 -- -0.212 9.74 -- -- -- --
216.49 0.689 3.11 -0.904 0.187 -- -- -- -0.214 8.54 -- -- -- --
196.39 0.653 3.1 -0.995 -- 2.22 -- -- -0.192 -- 0.8837 6 8.4 19.9
219.02 0.689 3.09 -- 0.232 2.1 -- -- -0.116 11 0.9331 6 8.43 19.9
218.45 0.691 3.11 -0.903 -- -- -- -- -0.213 -- -- -- -- --
238.03 0.722 3.08 -- 0.185 -- -- -- -0.114 8.9 -- -- -- --
222.21 0.694 3.08 -- -- 2.01 -- -- -0.0827 -- 0.8583 6 8.35 20
239.98 0.723 3.09 -- -- -- -- -- -0.112 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 185.33 wind 1.0 10 < th dose dependent rect. 8 20
3 185.45 wind 1.0 10 < th dose dependent rect. 1 3
4 185.71 wind 1.0 10 < th dose dependent rect. 22 6
14 186.15 wind 1.0 10 < th dose dependent rect. 11 17
22 188.36 wind 1.0 10 < th dose dependent sin 17 NA
25 189.62 wind 7.0 1440 > th dose independent rect. 3 1
26 189.62 wind 7.0 1440 > th dose dependent rect. 3 1
56 190.40 atmosphere 995.0 43200 > th dose independent rect. 23 11
58 190.43 atmosphere 995.0 43200 < th dose independent rect. 22 12
59 190.47 atmosphere 995.0 43200 > th dose independent rect. 4 4
63 190.53 atmosphere 995.0 43200 < th dose independent rect. 1 8
64 190.53 atmosphere 995.0 43200 < th dose dependent rect. 3 5
67 190.60 atmosphere 995.0 43200 > th dose independent rect. 1 8
75 190.74 atmosphere 995.0 43200 < th dose independent rect. 4 4
86 190.87 atmosphere 995.0 43200 > th dose independent sin 8 NA
90 190.89 atmosphere 995.0 43200 < th dose independent sin 8 NA
91 190.90 atmosphere 995.0 43200 < th dose dependent sin 11 NA
97 190.93 atmosphere 995.0 43200 < th dose dependent rect. 18 15
98 190.94 atmosphere 995.0 43200 < th dose dependent rect. 21 12
118 191.38 wind 1.0 10 < th dose dependent rect. 1 1
139 191.89 wind 1.0 10 < th dose dependent rect. 1 9
152 192.29 wind 1.0 10 < th dose independent rect. 1 4
166 192.59 wind 7.0 14400 > th dose dependent rect. 23 1
177 192.82 wind 1.0 10 < th dose dependent rect. 1 22
183 192.93 wind 9.0 14400 > th dose dependent rect. 23 3
197 193.05 precipitation 0.1 4320 > th dose independent rect. 24 6
198 193.09 precipitation 0.1 4320 < th dose independent rect. 24 6
199 193.09 precipitation 0.1 4320 < th dose dependent rect. 24 6
200 193.10 radiation 1.0 14400 < th dose dependent rect. 14 3
202 193.14 wind 7.0 14400 < th dose independent rect. 23 1
204 193.17 precipitation 0.1 4320 > th dose dependent rect. 24 6
217 193.34 radiation 1.0 14400 > th dose independent rect. 14 2
219 193.38 radiation 1.0 14400 < th dose independent rect. 14 2
224 193.46 wind 7.0 14400 > th dose independent rect. 23 1
230 193.56 wind 9.0 14400 > th dose independent rect. 23 3
237 193.69 radiation 1.0 14400 < th dose independent rect. 12 4
293 194.56 humidity 90.0 14400 > th dose dependent rect. 12 1
294 194.57 precipitation 0.1 4320 > th dose independent rect. 2 2
325 194.99 precipitation 0.1 4320 > th dose dependent rect. 2 2
331 195.04 radiation 1.0 14400 < th dose independent rect. 9 7
332 195.06 radiation 1.0 14400 > th dose independent rect. 9 7
337 195.13 wind 1.0 10 < th dose independent rect. 22 4
349 195.29 wind 1.0 10 < th dose independent rect. 1 1
354 195.35 radiation 40.0 14400 > th dose independent rect. 7 1
370 195.35 radiation 40.0 14400 > th dose dependent rect. 7 1
399 195.53 wind 1.0 10 < th dose independent rect. 15 11
400 195.54 precipitation 0.1 4320 < th dose independent rect. 2 2
401 195.54 wind 1.0 10 < th dose independent rect. 17 9
403 195.54 precipitation 0.1 4320 < th dose dependent rect. 2 2
417 195.61 wind 1.0 10 < th dose independent rect. 1 9
473 196.07 wind 1.0 10 < th dose independent rect. 6 22
479 196.15 wind 1.0 10 < th dose independent rect. 11 15
482 196.17 wind 1.0 10 < th dose independent rect. 9 19
486 196.20 humidity 90.0 14400 > th dose independent rect. 12 1
496 196.30 wind 3.0 14400 > th dose dependent rect. 21 1
501 196.37 wind 1.0 10 < th dose independent rect. 1 7
513 196.55 wind 3.0 43200 < th dose dependent rect. 22 1
515 196.59 wind 1.0 10 < th dose independent sin 17 NA
530 196.83 wind 3.0 4320 > th dose dependent rect. 6 3
535 196.96 wind 3.0 43200 < th dose independent rect. 22 1
536 196.97 humidity 90.0 14400 < th dose independent rect. 12 1
542 197.03 atmosphere 995.0 43200 < th dose dependent sin 15 NA
546 197.08 wind 5.0 14400 > th dose independent rect. 21 1
638 197.71 wind 3.0 4320 > th dose dependent rect. 8 1
639 197.71 humidity 70.0 43200 > th dose dependent rect. 15 1
675 197.85 wind 7.0 14400 < th dose independent rect. 21 4
706 198.00 wind 7.0 4320 < th dose dependent rect. 1 8
708 198.01 wind 1.0 4320 > th dose dependent rect. 1 9
751 198.19 wind 9.0 4320 < th dose dependent rect. 4 5
778 198.37 wind 3.0 4320 > th dose independent rect. 1 9
799 198.49 humidity 90.0 4320 > th dose dependent rect. 6 9
810 198.54 wind 5.0 14400 < th dose independent rect. 8 3
818 198.57 temperature 25.0 14400 > th dose independent rect. 16 1
839 198.66 wind 1.0 14400 < th dose dependent rect. 1 7
840 198.67 wind 5.0 14400 > th dose independent rect. 8 3
850 198.70 wind 1.0 10 < th dose independent rect. 1 22
892 198.91 wind 5.0 14400 > th dose independent rect. 9 1
916 198.98 temperature 25.0 14400 < th dose independent rect. 16 1
938 199.10 wind 1.0 4320 > th dose dependent rect. 22 12
947 199.13 wind 3.0 4320 < th dose independent rect. 1 9
957 199.16 wind 3.0 14400 > th dose independent rect. 21 15