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Os03g0695600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteasome subunit beta type 2 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit beta-4).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0113) R2 : 0.000166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00653 (0.0237) R2dN8 : 0.000214 R2N8 : 0.000166
σ : 0.212
deviance : 20.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.21 0.164 12.9 0.081 0.299 -0.162 -0.0859 -0.797 0.00856 1.49 20.59 814 -- --
13.17 0.169 12.9 0.267 0.281 -0.141 -0.139 -- 0.0867 0.926 24.1 348 -- --
12.24 0.163 12.9 0.0787 0.299 -0.165 -- -0.827 0.0078 1.47 20.6 829 -- --
13.29 0.17 12.8 0.253 0.273 -0.123 -- -- 0.0807 1.27 24 318 -- --
17.63 0.196 12.9 0.0908 -- -0.125 -- -0.733 0.0115 -- 20.6 742 -- --
14.1 0.176 12.9 0.199 0.288 -- -0.254 -- 0.0229 1.66 -- -- -- --
14.35 0.177 12.9 0.207 0.289 -- -- -- 0.0243 1.72 -- -- -- --
17.24 0.194 12.8 0.286 -- -0.164 -- -- 0.106 -- 24 318 -- --
14.95 0.18 12.9 -- 0.276 -0.0895 -- -- 0.0364 1.4 24.12 305 -- --
19.42 0.206 12.9 0.218 -- -- -- -- 0.0308 -- -- -- -- --
15.48 0.184 12.9 -- 0.292 -- -- -- 0.00128 1.74 -- -- -- --
17.87 0.197 12.9 -- -- -0.192 -- -- 0.035 -- 28.3 88 -- --
20.68 0.212 12.9 -- -- -- -- -- 0.00653 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.27 radiation 40.0 90 < th dose dependent rect. 5 6
2 10.35 radiation 20.0 90 < th dose independent rect. 5 6
7 10.58 radiation 10.0 270 < th dose dependent rect. 5 1
12 10.69 temperature 30.0 90 < th dose independent rect. 5 4
17 10.75 humidity 70.0 90 > th dose independent rect. 5 4
18 10.75 atmosphere 1010.0 90 < th dose independent rect. 5 4
20 10.76 wind 9.0 90 < th dose independent rect. 9 20
21 10.77 humidity 50.0 90 > th dose dependent rect. 5 4
22 10.78 wind 1.0 90 > th dose independent rect. 5 4
23 10.78 wind 7.0 90 < th dose independent rect. 5 4
25 10.78 temperature 10.0 90 > th dose independent rect. 5 4
27 10.78 humidity 50.0 90 > th dose independent rect. 5 4
29 10.78 atmosphere 995.0 90 > th dose independent rect. 5 4
31 10.78 precipitation 0.1 90 < th dose independent rect. 5 4
33 10.78 radiation 40.0 90 < th dose independent rect. 5 18
34 10.78 temperature 10.0 90 > th dose independent rect. 9 20
36 10.78 precipitation 0.1 90 < th dose dependent rect. 5 4
39 10.81 temperature 30.0 90 < th dose dependent rect. 5 6
42 10.84 radiation 10.0 270 < th dose independent rect. 5 1
44 10.87 radiation 40.0 90 < th dose dependent rect. 5 18
45 10.88 wind 1.0 270 > th dose independent rect. 5 1
48 10.88 temperature 10.0 90 > th dose dependent rect. 9 20
56 10.93 wind 7.0 270 < th dose independent rect. 5 1
58 10.93 temperature 10.0 270 > th dose independent rect. 5 1
60 10.93 temperature 30.0 270 < th dose independent rect. 5 1
61 10.93 humidity 50.0 270 > th dose independent rect. 5 1
64 10.93 atmosphere 995.0 270 > th dose independent rect. 5 1
65 10.93 atmosphere 1015.0 270 < th dose independent rect. 5 1
69 10.93 precipitation 0.1 270 < th dose independent rect. 5 1
71 10.93 temperature 10.0 270 > th dose independent rect. 6 23
72 10.93 precipitation 0.1 270 < th dose dependent rect. 5 1
73 10.94 wind 9.0 270 < th dose independent rect. 6 23
80 10.97 wind 9.0 270 < th dose independent rect. 7 21
88 11.00 atmosphere 995.0 90 > th dose independent rect. 9 20
90 11.00 radiation 40.0 90 < th dose dependent rect. 5 8
99 11.03 wind 9.0 90 < th dose dependent rect. 5 4
100 11.03 radiation 40.0 90 < th dose dependent rect. 5 10
111 11.04 temperature 10.0 270 > th dose independent rect. 7 21
116 11.05 temperature 30.0 90 < th dose dependent rect. 5 4
121 11.07 radiation 20.0 90 < th dose independent rect. 5 18
122 11.07 precipitation 0.1 90 < th dose independent rect. 9 20
123 11.07 precipitation 0.1 90 < th dose dependent rect. 9 20
125 11.08 atmosphere 1015.0 90 < th dose independent rect. 9 20
138 11.12 humidity 50.0 270 > th dose dependent rect. 5 1
139 11.12 atmosphere 1015.0 90 < th dose dependent rect. 5 4
140 11.12 humidity 50.0 90 > th dose dependent rect. 22 7
141 11.13 temperature 10.0 1440 > th dose independent rect. 6 4
144 11.13 atmosphere 995.0 1440 > th dose independent rect. 6 4
145 11.13 atmosphere 1015.0 1440 < th dose independent rect. 6 4
147 11.13 temperature 10.0 1440 > th dose independent rect. 10 20
167 11.17 precipitation 0.1 90 < th dose independent rect. 5 17
174 11.17 precipitation 0.1 90 < th dose dependent rect. 5 17
182 11.19 precipitation 0.1 270 < th dose independent rect. 7 21
183 11.19 wind 9.0 270 < th dose dependent rect. 5 1
187 11.19 precipitation 0.1 270 < th dose dependent rect. 7 21
210 11.21 radiation 10.0 270 < th dose dependent rect. 4 9
215 11.22 temperature 10.0 270 > th dose dependent rect. 5 1
220 11.22 wind 9.0 90 < th dose dependent rect. 22 7
221 11.22 temperature 30.0 90 < th dose dependent rect. 5 10
226 11.23 wind 1.0 90 > th dose independent rect. 9 20
227 11.23 temperature 30.0 270 < th dose dependent rect. 5 1
231 11.24 humidity 80.0 90 > th dose independent rect. 23 6
232 11.24 wind 5.0 90 < th dose independent rect. 22 7
235 11.24 temperature 10.0 90 > th dose dependent rect. 5 4
249 11.26 radiation 20.0 270 < th dose independent rect. 17 15
274 11.28 wind 9.0 270 < th dose independent rect. 7 10
276 11.28 temperature 30.0 270 < th dose dependent rect. 3 5
288 11.29 temperature 10.0 90 > th dose independent rect. 22 7
289 11.29 temperature 30.0 90 < th dose independent rect. 22 7
290 11.29 humidity 50.0 90 > th dose independent rect. 22 7
293 11.29 atmosphere 995.0 90 > th dose independent rect. 22 7
294 11.29 radiation 20.0 90 < th dose independent rect. 22 7
297 11.29 radiation 20.0 90 < th dose independent rect. 5 8
298 11.29 temperature 10.0 90 > th dose independent rect. 5 17
299 11.29 atmosphere 1015.0 90 < th dose independent rect. 5 17
302 11.29 radiation 30.0 90 < th dose dependent rect. 22 7
309 11.30 radiation 1.0 90 < th dose independent rect. 22 7
314 11.30 radiation 10.0 90 < th dose dependent rect. 22 7
326 11.31 radiation 40.0 270 < th dose dependent rect. 17 15
341 11.32 precipitation 0.1 90 < th dose independent rect. 22 7
351 11.32 precipitation 0.1 90 < th dose dependent rect. 22 7
357 11.33 temperature 10.0 270 > th dose independent rect. 7 10
358 11.33 atmosphere 1015.0 270 < th dose independent rect. 7 10
359 11.33 temperature 10.0 270 > th dose independent rect. 17 14
362 11.33 precipitation 0.1 270 < th dose independent rect. 17 14
364 11.33 atmosphere 995.0 270 > th dose independent rect. 7 21
371 11.33 precipitation 0.1 270 < th dose dependent rect. 17 14
395 11.34 radiation 40.0 10 < th dose dependent rect. 6 17
411 11.36 precipitation 0.1 270 < th dose independent rect. 7 10
416 11.36 precipitation 0.1 270 < th dose dependent rect. 7 10
421 11.37 humidity 50.0 270 > th dose independent rect. 17 14
423 11.37 atmosphere 995.0 90 > th dose dependent rect. 5 4
430 11.38 atmosphere 1015.0 90 < th dose independent rect. 22 7
432 11.38 atmosphere 1015.0 270 < th dose dependent rect. 5 1
433 11.38 temperature 10.0 90 > th dose dependent rect. 22 7
447 11.40 wind 9.0 270 < th dose independent rect. 17 14
448 11.40 wind 9.0 90 < th dose independent rect. 5 17
450 11.40 precipitation 0.1 270 < th dose independent rect. 6 23
457 11.40 precipitation 0.1 270 < th dose dependent rect. 6 23
459 11.41 radiation 1.0 90 > th dose independent rect. 4 5
474 11.42 temperature 10.0 1440 > th dose independent rect. 23 7
477 11.42 temperature 30.0 1440 < th dose independent rect. 23 7
481 11.42 humidity 50.0 1440 > th dose independent rect. 23 7
490 11.42 atmosphere 995.0 1440 > th dose independent rect. 23 7
491 11.42 radiation 20.0 1440 < th dose independent rect. 23 7
500 11.42 temperature 10.0 1440 > th dose independent rect. 6 17
512 11.43 atmosphere 995.0 270 > th dose independent rect. 17 14
514 11.43 radiation 30.0 10 < th dose independent rect. 5 18
558 11.45 atmosphere 995.0 90 > th dose independent rect. 5 17
577 11.46 atmosphere 995.0 270 > th dose dependent rect. 5 1
614 11.48 humidity 50.0 90 > th dose independent rect. 9 20
620 11.48 radiation 40.0 270 < th dose dependent rect. 3 18
621 11.48 wind 9.0 90 < th dose dependent rect. 9 20
637 11.49 wind 1.0 270 > th dose independent rect. 7 10
653 11.49 atmosphere 995.0 90 > th dose dependent rect. 23 6
694 11.51 atmosphere 995.0 270 > th dose independent rect. 7 10
770 11.55 wind 9.0 1440 < th dose independent rect. 6 3
774 11.55 humidity 50.0 1440 > th dose independent rect. 6 3
812 11.57 radiation 1.0 270 > th dose independent rect. 7 10
842 11.59 radiation 20.0 10 < th dose independent rect. 5 9
845 11.59 temperature 30.0 90 < th dose independent rect. 5 17
852 11.59 radiation 40.0 10 < th dose dependent rect. 5 9
947 11.63 humidity 60.0 90 > th dose dependent rect. 5 9
953 11.64 wind 9.0 1440 < th dose independent rect. 24 6
963 11.64 humidity 50.0 90 > th dose dependent rect. 5 17
976 11.65 radiation 1.0 90 < th dose dependent sin 9 NA