Os03g0695400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os03g0695400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.56 | 0.35 | 6.62 | 0.526 | 0.927 | -1.08 | 0.185 | 2.54 | 0.119 | 19.1 | 21.14 | 2372 | -- | -- |
| 58 | 0.355 | 6.67 | 0.0735 | 0.836 | -0.975 | 0.113 | -- | 0.0809 | 18.8 | 18.6 | 8616 | -- | -- |
| 55.59 | 0.347 | 6.61 | 0.553 | 0.927 | -1.08 | -- | 2.71 | 0.126 | 19.1 | 21.5 | 2380 | -- | -- |
| 57.67 | 0.354 | 6.66 | 0.0801 | 0.867 | -1.13 | -- | -- | 0.116 | 18.6 | 16.53 | 8854 | -- | -- |
| 94.96 | 0.454 | 6.59 | 0.607 | -- | -1.07 | -- | 2.73 | 0.0878 | -- | 21.82 | 4280 | -- | -- |
| 84.18 | 0.43 | 6.75 | -0.562 | 0.873 | -- | 0.158 | -- | -0.291 | 18.6 | -- | -- | -- | -- |
| 84.24 | 0.43 | 6.75 | -0.564 | 0.874 | -- | -- | -- | -0.291 | 18.5 | -- | -- | -- | -- |
| 95.27 | 0.455 | 6.64 | 0.0971 | -- | -1.18 | -- | -- | 0.0851 | -- | 16 | 8555 | -- | -- |
| 57.69 | 0.354 | 6.67 | -- | 0.858 | -1.11 | -- | -- | 0.0716 | 18.7 | 16.26 | 8787 | -- | -- |
| 123.97 | 0.52 | 6.73 | -0.586 | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
| 92.64 | 0.45 | 6.74 | -- | 0.881 | -- | -- | -- | -0.228 | 18.5 | -- | -- | -- | -- |
| 95.39 | 0.455 | 6.65 | -- | -- | -1.13 | -- | -- | 0.0643 | -- | 16.3 | 8564 | -- | -- |
| 133.02 | 0.538 | 6.72 | -- | -- | -- | -- | -- | -0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 4 | 54.34 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 11 | 54.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 21 | 54.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 112 | 55.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 149 | 55.92 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 150 | 55.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 186 | 56.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 193 | 56.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 234 | 56.27 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 240 | 56.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 245 | 56.31 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 248 | 56.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 282 | 56.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 290 | 56.44 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 293 | 56.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 294 | 56.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 298 | 56.47 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 17 |
| 302 | 56.49 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 336 | 56.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 17 |
| 374 | 56.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 22 |
| 423 | 56.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 449 | 56.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 8 |
| 500 | 56.79 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 517 | 56.81 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 540 | 56.84 | temperature | 25 | 4320 | > th | dose independent | sin | 18 | NA |
| 541 | 56.84 | temperature | 25 | 4320 | < th | dose independent | sin | 18 | NA |
| 552 | 56.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 578 | 56.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 3 |