Os03g0692000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
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Os03g0692000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.47 | 0.459 | 7.09 | 1.79 | 0.378 | -1.03 | 0.227 | 2.99 | 0.701 | 4.49 | 20.28 | 264 | -- | -- |
| 99.78 | 0.469 | 7.14 | 1.25 | 0.506 | -1.14 | -0.562 | -- | 0.549 | 5.98 | 14.59 | 704 | -- | -- |
| 95.57 | 0.455 | 7.09 | 1.76 | 0.377 | -1.03 | -- | 2.83 | 0.694 | 4.55 | 20.3 | 261 | -- | -- |
| 100.13 | 0.466 | 7.15 | 1.26 | 0.417 | -1.13 | -- | -- | 0.548 | 5.03 | 14.13 | 201 | -- | -- |
| 100.56 | 0.467 | 7.07 | 1.9 | -- | -1.36 | -- | 3.23 | 0.771 | -- | 20.95 | 235 | -- | -- |
| 112.86 | 0.498 | 7.18 | 1.02 | 0.738 | -- | -0.363 | -- | 0.388 | 4.64 | -- | -- | -- | -- |
| 113.21 | 0.498 | 7.18 | 1.02 | 0.736 | -- | -- | -- | 0.389 | 4.63 | -- | -- | -- | -- |
| 106.57 | 0.481 | 7.14 | 1.36 | -- | -1.52 | -- | -- | 0.614 | -- | 14.8 | 219 | -- | -- |
| 136.03 | 0.543 | 7.2 | -- | 0.597 | -0.559 | -- | -- | 0.291 | 5.07 | 26.2 | 12 | -- | -- |
| 141.99 | 0.557 | 7.19 | 1.05 | -- | -- | -- | -- | 0.409 | -- | -- | -- | -- | -- |
| 140.6 | 0.555 | 7.2 | -- | 0.755 | -- | -- | -- | 0.276 | 4.59 | -- | -- | -- | -- |
| 147.69 | 0.566 | 7.19 | -- | -- | -0.919 | -- | -- | 0.368 | -- | 24.2 | 149 | -- | -- |
| 170.94 | 0.61 | 7.21 | -- | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 9 | 88.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 11 | 88.47 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 21 | 89.30 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 27 | 89.73 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 28 | 89.82 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 29 | 89.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 39 | 90.38 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 46 | 90.80 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 68 | 91.34 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 74 | 91.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 77 | 91.61 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 78 | 91.63 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 85 | 91.74 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 96 | 91.89 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 97 | 91.90 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 100 | 91.94 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 103 | 91.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 105 | 91.99 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 131 | 92.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 137 | 92.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 143 | 92.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 172 | 92.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 195 | 92.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 196 | 92.47 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 198 | 92.49 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 227 | 92.60 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 248 | 92.67 | wind | 3 | 43200 | > th | dose dependent | sin | 17 | NA |
| 254 | 92.69 | wind | 9 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 284 | 92.77 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 305 | 92.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 331 | 92.87 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 14 |
| 342 | 92.89 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 357 | 92.91 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 19 |
| 385 | 92.97 | wind | 9 | 43200 | < th | dose dependent | sin | 18 | NA |
| 407 | 93.03 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 409 | 93.03 | wind | 9 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 412 | 93.04 | wind | 5 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 443 | 93.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 475 | 93.15 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 543 | 93.26 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 592 | 93.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 593 | 93.34 | temperature | 20 | 10 | > th | dose dependent | sin | 0 | NA |
| 601 | 93.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 625 | 93.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 641 | 93.42 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 646 | 93.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 648 | 93.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 652 | 93.43 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 659 | 93.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 711 | 93.49 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 798 | 93.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 951 | 93.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 957 | 93.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 986 | 93.84 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 999 | 93.85 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |