Os03g0691800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HIPL1 protein precursor.
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Os03g0691800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HIPL1 protein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.01 | 0.488 | 7.16 | -0.447 | 0.104 | 2.65 | -1.08 | 4.2 | -0.585 | 6.27 | 19.31 | 6189 | -- | -- |
| 131.52 | 0.534 | 7 | 0.0406 | 0.149 | 2.11 | -0.816 | -- | -0.453 | 5.81 | 17.94 | 7604 | -- | -- |
| 108.26 | 0.485 | 7.19 | -0.476 | 0.163 | 2.92 | -- | 4.94 | -0.609 | 10.2 | 18.96 | 6216 | -- | -- |
| 127.26 | 0.525 | 6.95 | 0.0576 | 0.15 | 1.58 | -- | -- | -0.369 | 6.19 | 19.9 | 7654 | -- | -- |
| 109.93 | 0.488 | 7.18 | -0.445 | -- | 3.02 | -- | 4.98 | -0.592 | -- | 19 | 6219 | -- | -- |
| 158.02 | 0.589 | 7.09 | -1.14 | 0.108 | -- | -1.05 | -- | -0.908 | 6.24 | -- | -- | -- | -- |
| 158.86 | 0.59 | 7.08 | -1.15 | 0.199 | -- | -- | -- | -0.902 | 10.2 | -- | -- | -- | -- |
| 127.23 | 0.525 | 6.97 | 0.0134 | -- | 1.5 | -- | -- | -0.394 | -- | 20.1 | 7695 | -- | -- |
| 125.84 | 0.522 | 7 | -- | 0.16 | 1.47 | -- | -- | -0.475 | 7.96 | 20 | 7655 | -- | -- |
| 161.28 | 0.593 | 7.09 | -1.15 | -- | -- | -- | -- | -0.902 | -- | -- | -- | -- | -- |
| 193.51 | 0.651 | 7.05 | -- | 0.206 | -- | -- | -- | -0.774 | 10.6 | -- | -- | -- | -- |
| 126.83 | 0.525 | 6.98 | -- | -- | 1.56 | -- | -- | -0.45 | -- | 19.8 | 6279 | -- | -- |
| 196.13 | 0.654 | 7.06 | -- | -- | -- | -- | -- | -0.775 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 3 | 105.96 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 8 | 107.71 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 12 | 108.04 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 19 | 108.74 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 20 | 108.89 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 28 | 109.08 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 34 | 109.16 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 50 | 109.49 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 52 | 109.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 232 | 110.90 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 292 | 111.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 420 | 112.40 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 449 | 112.59 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 454 | 112.63 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 527 | 113.11 | humidity | 50 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 577 | 113.40 | humidity | 50 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 590 | 113.48 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 605 | 113.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 631 | 113.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 670 | 113.85 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 704 | 113.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 14 |
| 708 | 113.95 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 717 | 114.01 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 725 | 114.02 | humidity | 50 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 733 | 114.05 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 742 | 114.10 | humidity | 50 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 762 | 114.18 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 788 | 114.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 861 | 114.52 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 896 | 114.67 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 978 | 114.89 | humidity | 50 | 14400 | > th | dose independent | sin | 7 | NA |