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Os03g0688200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0134) R2 : 0.674
β1 : 0.906 (0.0492) R2dD : 0.251 R2D : 0.184
β2 : 0.845 (0.0342) R2dC : 0.439 R2C : 0.402
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.232 (0.0287) R2dN8 : 0.0629 R2N8 : -0.00159
σ : 0.253
deviance : 29.14
__
_____
C
peak time of C : 15.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.85 0.229 12.7 0.943 0.771 0.506 0.222 -0.108 0.253 16.3 51.04 1209 -- --
23.86 0.228 12.7 0.931 0.772 0.496 0.207 -- 0.25 16.3 50 1215 -- --
23.98 0.228 12.7 0.94 0.773 0.502 -- -0.0545 0.254 16.3 50.86 1215 -- --
23.98 0.228 12.7 0.934 0.772 0.5 -- -- 0.251 16.3 50.01 1215 -- --
47.19 0.322 12.7 0.896 -- -0.708 -- -0.294 0.202 -- 53.33 1202 -- --
28.96 0.252 12.7 0.903 0.844 -- 0.247 -- 0.231 15.9 -- -- -- --
29.14 0.253 12.7 0.906 0.845 -- -- -- 0.232 15.9 -- -- -- --
47.42 0.322 12.7 0.89 -- -0.716 -- -- 0.201 -- 53.33 1202 -- --
41.55 0.3 12.7 -- 0.833 0.501 -- -- 0.221 16 49.71 47520 -- --
68.28 0.386 12.7 0.871 -- -- -- -- 0.21 -- -- -- -- --
50.77 0.333 12.7 -- 0.828 -- -- -- 0.131 15.9 -- -- -- --
68.32 0.386 12.7 -- -- -0.701 -- -- 0.102 -- 53.33 1202 -- --
88.3 0.439 12.7 -- -- -- -- -- 0.113 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.24 wind 5.0 270 < th dose independent rect. 1 4
2 20.42 wind 5.0 270 < th dose independent rect. 24 6
6 20.89 precipitation 0.1 270 < th dose independent rect. 1 4
7 20.89 precipitation 0.1 270 < th dose dependent rect. 1 4
8 21.00 wind 9.0 270 < th dose dependent rect. 1 4
10 21.06 wind 9.0 270 < th dose independent rect. 5 20
12 21.11 radiation 1.0 270 < th dose dependent rect. 1 4
14 21.13 temperature 10.0 270 > th dose independent rect. 1 4
16 21.13 temperature 30.0 270 < th dose independent rect. 1 4
17 21.13 humidity 50.0 270 > th dose independent rect. 1 4
20 21.13 atmosphere 995.0 270 > th dose independent rect. 1 4
21 21.13 atmosphere 1010.0 270 < th dose independent rect. 1 4
23 21.13 radiation 20.0 270 < th dose independent rect. 1 4
26 21.13 temperature 10.0 270 > th dose independent rect. 5 20
32 21.15 radiation 1.0 270 < th dose independent rect. 1 4
35 21.16 precipitation 0.1 270 < th dose independent rect. 24 6
36 21.16 precipitation 0.1 270 < th dose dependent rect. 24 6
37 21.20 temperature 15.0 270 > th dose independent rect. 13 16
38 21.28 wind 1.0 270 > th dose independent rect. 1 4
40 21.31 wind 9.0 270 < th dose dependent rect. 24 6
42 21.34 wind 9.0 270 < th dose independent rect. 6 18
45 21.39 atmosphere 1010.0 270 < th dose independent rect. 24 6
47 21.40 temperature 15.0 270 > th dose independent rect. 24 6
50 21.41 temperature 30.0 270 < th dose independent rect. 24 6
51 21.41 humidity 50.0 270 > th dose independent rect. 24 6
54 21.41 atmosphere 995.0 270 > th dose independent rect. 24 6
56 21.41 radiation 20.0 270 < th dose independent rect. 24 6
59 21.41 temperature 10.0 270 > th dose independent rect. 6 18
60 21.41 humidity 50.0 270 > th dose independent rect. 5 20
61 21.41 radiation 20.0 270 < th dose dependent rect. 24 6
69 21.45 wind 1.0 270 > th dose independent rect. 10 9
70 21.45 precipitation 0.1 270 < th dose independent rect. 5 20
71 21.45 atmosphere 1000.0 270 > th dose dependent rect. 1 4
72 21.45 precipitation 0.1 270 < th dose dependent rect. 5 20
85 21.54 atmosphere 995.0 270 > th dose independent rect. 5 20
126 21.67 precipitation 0.1 270 < th dose independent rect. 6 18
127 21.67 precipitation 0.1 270 < th dose dependent rect. 6 18
128 21.68 humidity 50.0 270 > th dose independent rect. 19 15
130 21.69 temperature 10.0 270 > th dose independent rect. 10 9
131 21.69 atmosphere 1015.0 270 < th dose independent rect. 10 9
132 21.69 temperature 10.0 270 > th dose independent rect. 19 15
133 21.69 atmosphere 995.0 270 > th dose independent rect. 19 15
135 21.70 temperature 10.0 270 > th dose dependent rect. 1 4
136 21.71 wind 9.0 270 < th dose independent rect. 19 15
137 21.71 precipitation 0.1 270 < th dose independent rect. 13 16
139 21.71 precipitation 0.1 270 < th dose dependent rect. 13 16
140 21.72 precipitation 0.1 270 < th dose independent rect. 10 9
142 21.72 precipitation 0.1 270 < th dose dependent rect. 10 9
143 21.73 wind 1.0 270 > th dose independent rect. 3 1
149 21.74 atmosphere 995.0 270 > th dose independent rect. 6 18
180 21.83 atmosphere 1005.0 270 > th dose independent rect. 1 4
186 21.85 humidity 50.0 270 > th dose dependent rect. 1 4
192 21.86 radiation 1.0 270 < th dose dependent rect. 1 11
218 21.89 wind 9.0 270 < th dose independent rect. 5 8
219 21.89 temperature 10.0 270 > th dose independent rect. 5 8
220 21.89 atmosphere 995.0 270 > th dose independent rect. 5 8
221 21.89 atmosphere 1015.0 270 < th dose independent rect. 5 8
243 21.91 precipitation 0.1 270 < th dose independent rect. 5 8
245 21.91 precipitation 0.1 270 < th dose dependent rect. 5 8
249 21.92 humidity 50.0 270 > th dose dependent rect. 17 8
252 21.93 temperature 10.0 270 > th dose dependent rect. 24 6
257 21.95 wind 3.0 10 < th dose independent rect. 2 5
266 21.98 wind 9.0 270 < th dose independent rect. 10 9
267 21.98 radiation 1.0 270 < th dose independent rect. 24 12
286 22.04 atmosphere 1005.0 270 > th dose independent rect. 24 6
296 22.07 humidity 50.0 270 > th dose independent rect. 5 8
297 22.07 humidity 60.0 270 > th dose independent rect. 17 8
301 22.08 wind 9.0 270 < th dose independent rect. 13 16
314 22.11 precipitation 0.1 270 < th dose independent rect. 1 16
316 22.11 radiation 10.0 270 < th dose dependent rect. 17 8
318 22.11 precipitation 0.1 270 < th dose dependent rect. 1 16
337 22.17 temperature 30.0 270 < th dose independent rect. 17 8
358 22.20 radiation 10.0 270 < th dose independent rect. 17 8
382 22.21 wind 7.0 10 < th dose dependent rect. 2 5
395 22.23 precipitation 0.1 10 < th dose independent rect. 2 5
401 22.23 precipitation 0.1 10 < th dose dependent rect. 2 5
444 22.28 radiation 1.0 270 < th dose dependent rect. 5 20
447 22.29 precipitation 0.1 270 < th dose independent rect. 19 15
453 22.29 precipitation 0.1 270 < th dose dependent rect. 19 15
483 22.31 atmosphere 995.0 270 > th dose independent rect. 17 8
484 22.31 radiation 1.0 270 < th dose dependent sin 5 NA
490 22.32 wind 9.0 270 < th dose independent rect. 17 8
495 22.34 temperature 10.0 270 > th dose independent rect. 17 8
499 22.34 temperature 10.0 270 > th dose independent rect. 1 16
500 22.34 atmosphere 1015.0 270 < th dose independent rect. 1 16
579 22.45 wind 7.0 10 < th dose dependent rect. 2 7
639 22.52 radiation 1.0 270 < th dose independent sin 6 NA
642 22.52 wind 9.0 270 < th dose independent rect. 1 16
663 22.55 wind 9.0 270 < th dose dependent rect. 6 18
664 22.56 radiation 1.0 270 > th dose independent sin 6 NA
680 22.56 radiation 1.0 270 < th dose independent rect. 5 20
681 22.56 radiation 30.0 90 < th dose dependent rect. 2 7
683 22.57 radiation 10.0 10 < th dose independent rect. 2 6
703 22.59 precipitation 0.1 270 < th dose independent rect. 17 8
707 22.59 radiation 40.0 10 < th dose dependent rect. 2 7
708 22.59 precipitation 0.1 270 < th dose dependent rect. 17 8
729 22.61 wind 9.0 270 < th dose dependent rect. 5 8
734 22.62 atmosphere 1010.0 270 < th dose independent rect. 13 16
773 22.64 radiation 1.0 270 < th dose dependent rect. 10 15
780 22.65 radiation 40.0 270 < th dose independent rect. 13 16
783 22.65 precipitation 0.1 10 < th dose independent rect. 7 19
791 22.65 precipitation 0.1 10 < th dose dependent rect. 7 19
838 22.70 temperature 10.0 10 > th dose independent rect. 2 5
840 22.70 temperature 30.0 10 < th dose independent rect. 2 5
841 22.70 humidity 50.0 10 > th dose independent rect. 2 5
844 22.70 atmosphere 995.0 10 > th dose independent rect. 2 5
845 22.70 atmosphere 1015.0 10 < th dose independent rect. 2 5
858 22.70 atmosphere 1015.0 270 < th dose independent rect. 6 18
860 22.70 temperature 10.0 10 > th dose independent rect. 7 19
901 22.73 radiation 1.0 270 < th dose independent rect. 10 15
945 22.76 wind 9.0 10 < th dose independent rect. 7 19
972 22.77 humidity 50.0 270 > th dose dependent rect. 5 20
975 22.78 radiation 10.0 10 < th dose independent rect. 2 12
976 22.78 atmosphere 995.0 270 > th dose independent rect. 1 16
977 22.78 wind 1.0 270 > th dose independent rect. 1 17