Os03g0687700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0687700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 902.96 | 1.41 | 7.46 | -0.853 | 0.881 | -3.52 | 2.97 | 10.4 | -2.7 | 4.91 | 7.655 | 1390 | 10.4 | -- |
| 1010.67 | 1.48 | 7.51 | -0.294 | 1.13 | -2.97 | 3.43 | -- | -2.55 | 6 | 6.081 | 1339 | 10.4 | -- |
| 917.84 | 1.41 | 7.46 | -0.964 | 0.92 | -3.54 | -- | 10.8 | -2.66 | 4.36 | 7.51 | 1366 | 10.5 | -- |
| 1055.77 | 1.51 | 7.5 | -0.455 | 1.16 | -3.16 | -- | -- | -2.5 | 6.05 | 6.08 | 1341 | 10.1 | -- |
| 968.61 | 1.45 | 7.48 | -0.908 | -- | -3.35 | -- | 11.3 | -2.7 | -- | 7.237 | 1390 | 9.95 | -- |
| 1147.9 | 1.59 | 7.47 | -0.741 | 0.475 | -- | 4.44 | -- | -2.25 | 5.49 | -- | -- | -- | -- |
| 1176.11 | 1.61 | 7.49 | -0.741 | 0.751 | -- | -- | -- | -2.28 | 2.19 | -- | -- | -- | -- |
| 1081.96 | 1.53 | 7.53 | -0.262 | -- | -2.97 | -- | -- | -2.38 | -- | 8.094 | 1412 | 8.94 | -- |
| 1060.34 | 1.52 | 7.49 | -- | 1.2 | -3.31 | -- | -- | -2.47 | 6.19 | 6.088 | 1342 | 9.98 | -- |
| 1209.72 | 1.63 | 7.49 | -0.71 | -- | -- | -- | -- | -2.26 | -- | -- | -- | -- | -- |
| 1190.58 | 1.61 | 7.47 | -- | 0.736 | -- | -- | -- | -2.2 | 2.17 | -- | -- | -- | -- |
| 1072.11 | 1.53 | 7.54 | -- | -- | -2.73 | -- | -- | -2.5 | -- | 8.099 | 1411 | 7.96 | -- |
| 1223 | 1.63 | 7.47 | -- | -- | -- | -- | -- | -2.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 939.18 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 3 | 946.86 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 954.01 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 9 | 958.02 | wind | 3 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 13 | 959.29 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 25 | 959.29 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 37 | 959.30 | wind | 3 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 41 | 959.54 | radiation | 20 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 45 | 959.98 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 51 | 960.63 | radiation | 30 | 1440 | < th | dose dependent | rect. | 10 | 7 |
| 55 | 960.88 | radiation | 30 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 72 | 961.42 | radiation | 30 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 85 | 962.51 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 95 | 962.85 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 135 | 963.88 | radiation | 10 | 1440 | < th | dose independent | rect. | 14 | 12 |
| 174 | 965.10 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 181 | 965.32 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 194 | 966.04 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 200 | 966.23 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 238 | 966.71 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 242 | 966.78 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 288 | 967.39 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 297 | 967.58 | radiation | 20 | 1440 | < th | dose dependent | sin | 19 | NA |
| 323 | 968.43 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 349 | 968.88 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 372 | 969.32 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 399 | 970.11 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 419 | 970.70 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 435 | 970.92 | radiation | 1 | 1440 | > th | dose dependent | sin | 17 | NA |
| 440 | 970.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 449 | 971.36 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 18 | 10 |
| 466 | 971.64 | radiation | 10 | 1440 | < th | dose independent | sin | 16 | NA |
| 475 | 972.18 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 516 | 973.29 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 13 | NA |
| 563 | 973.91 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 602 | 974.82 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 622 | 975.33 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 677 | 976.00 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 704 | 976.00 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 760 | 976.08 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 761 | 976.08 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 855 | 977.32 | atmosphere | 1005 | 10 | > th | dose independent | sin | 7 | NA |
| 978 | 979.28 | humidity | 70 | 1440 | < th | dose dependent | sin | 15 | NA |
| 984 | 979.44 | atmosphere | 995 | 43200 | < th | dose independent | sin | 10 | NA |
| 985 | 979.45 | atmosphere | 995 | 43200 | > th | dose independent | sin | 10 | NA |