Os03g0687000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0687000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.17 | 0.391 | 12.2 | 0.0933 | 0.603 | 1.6 | 0.35 | -0.775 | -0.0536 | 23.9 | 19.5 | 2424 | -- | -- |
| 70.12 | 0.39 | 12.2 | 0.212 | 0.6 | 1.75 | 0.303 | -- | -0.0315 | 23.9 | 19.4 | 2416 | -- | -- |
| 69.67 | 0.389 | 12.2 | 0.0963 | 0.598 | 1.61 | -- | -0.708 | -0.0493 | 23.9 | 19.5 | 2392 | -- | -- |
| 70.46 | 0.391 | 12.2 | 0.197 | 0.594 | 1.75 | -- | -- | -0.03 | 23.9 | 19.41 | 2402 | -- | -- |
| 91.86 | 0.446 | 12.2 | 0.044 | -- | 1.78 | -- | -0.684 | -0.0676 | -- | 19.47 | 2348 | -- | -- |
| 126.83 | 0.528 | 12.1 | 1.06 | 0.715 | -- | 0.149 | -- | 0.352 | 0.00204 | -- | -- | -- | -- |
| 126.93 | 0.528 | 12.1 | 1.06 | 0.715 | -- | -- | -- | 0.351 | 0.01 | -- | -- | -- | -- |
| 92.31 | 0.447 | 12.2 | 0.163 | -- | 1.91 | -- | -- | -0.0358 | -- | 19.4 | 2348 | -- | -- |
| 71.19 | 0.393 | 12.2 | -- | 0.603 | 1.84 | -- | -- | -0.064 | 23.9 | 19.4 | 2448 | -- | -- |
| 159.09 | 0.589 | 12.1 | 1.08 | -- | -- | -- | -- | 0.361 | -- | -- | -- | -- | -- |
| 156.38 | 0.585 | 12.1 | -- | 0.729 | -- | -- | -- | 0.233 | 0.0923 | -- | -- | -- | -- |
| 92.75 | 0.449 | 12.2 | -- | -- | 1.99 | -- | -- | -0.0798 | -- | 19.42 | 2348 | -- | -- |
| 189.83 | 0.643 | 12.1 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 10 | 68.27 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 15 | 68.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 21 | 68.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 78 | 69.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 98 | 69.71 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 117 | 69.89 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 118 | 69.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 169 | 70.18 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 222 | 70.48 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 229 | 70.55 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 236 | 70.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 259 | 70.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 269 | 70.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 288 | 70.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 6 |
| 300 | 70.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 308 | 71.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 326 | 71.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 344 | 71.14 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 418 | 71.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 419 | 71.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 434 | 71.51 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 436 | 71.52 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 461 | 71.63 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 475 | 71.68 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 803 | 72.65 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 17 |
| 827 | 72.68 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |