Os03g0686700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0686700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.87 | 0.719 | 5.59 | -0.0363 | 0.529 | -1.49 | -0.907 | -0.544 | 0.336 | 23.6 | 78.97 | 1363 | -- | -- |
| 233.98 | 0.712 | 5.58 | 0.00934 | 0.561 | -1.52 | -0.91 | -- | 0.347 | 23.7 | 78.46 | 1333 | -- | -- |
| 236.97 | 0.717 | 5.59 | -0.00555 | 0.585 | -1.49 | -- | -0.826 | 0.343 | 23.8 | 79 | 1317 | -- | -- |
| 237.52 | 0.718 | 5.58 | 0.0454 | 0.578 | -1.55 | -- | -- | 0.349 | 23.9 | 78.75 | 1321 | -- | -- |
| 249.9 | 0.736 | 5.58 | -0.00731 | -- | -1.66 | -- | -0.467 | 0.335 | -- | 79 | 1576 | -- | -- |
| 262.84 | 0.76 | 5.6 | -0.0736 | 0.479 | -- | -1.07 | -- | 0.274 | 23 | -- | -- | -- | -- |
| 267.7 | 0.766 | 5.6 | -0.0303 | 0.484 | -- | -- | -- | 0.278 | 23.1 | -- | -- | -- | -- |
| 249.54 | 0.736 | 5.57 | 0.0404 | -- | -1.69 | -- | -- | 0.345 | -- | 78.4 | 1576 | -- | -- |
| 237.58 | 0.718 | 5.58 | -- | 0.582 | -1.54 | -- | -- | 0.346 | 23.9 | 78.59 | 1321 | -- | -- |
| 282.33 | 0.785 | 5.59 | -0.019 | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
| 267.72 | 0.765 | 5.6 | -- | 0.484 | -- | -- | -- | 0.281 | 23.1 | -- | -- | -- | -- |
| 249.58 | 0.736 | 5.57 | -- | -- | -1.69 | -- | -- | 0.34 | -- | 78.6 | 1576 | -- | -- |
| 282.34 | 0.784 | 5.58 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 3 | 221.07 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 5 | 221.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 7 | 221.64 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 30 | 222.93 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 43 | 223.61 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 96 | 225.34 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 118 | 226.54 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 138 | 227.66 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 143 | 227.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 144 | 227.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 150 | 228.07 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 153 | 228.17 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 157 | 228.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 176 | 228.69 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 178 | 228.70 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 180 | 228.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 184 | 228.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 202 | 229.15 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 204 | 229.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 207 | 229.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 243 | 230.01 | wind | 7.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 244 | 230.01 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 274 | 230.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 310 | 230.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 317 | 231.05 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 339 | 231.34 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 341 | 231.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 353 | 231.56 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 366 | 231.69 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 372 | 231.73 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 380 | 231.78 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 408 | 232.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 409 | 232.08 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 13 |
| 414 | 232.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 422 | 232.21 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 433 | 232.31 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 453 | 232.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 488 | 232.98 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 491 | 233.01 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 546 | 233.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 574 | 233.60 | wind | 3.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 578 | 233.61 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 598 | 233.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 600 | 233.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 604 | 233.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 607 | 233.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 618 | 233.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 620 | 233.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 629 | 233.85 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 648 | 233.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 649 | 233.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 653 | 233.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 655 | 233.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 659 | 234.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 661 | 234.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 679 | 234.08 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 727 | 234.35 | humidity | 80.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 735 | 234.38 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 747 | 234.43 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 771 | 234.54 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 780 | 234.57 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 827 | 234.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 829 | 234.76 | humidity | 80.0 | 720 | < th | dose independent | rect. | 14 | 23 |
| 843 | 234.80 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 880 | 234.92 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 915 | 235.06 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 949 | 235.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 950 | 235.17 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 954 | 235.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 972 | 235.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 980 | 235.24 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 993 | 235.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |