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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0686300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dilute domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0277) R2 : 0.258
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 6.31 (0.522) R2dE : 0.238 R2E : 0.226
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.228 (0.0583) R2dN8 : 0.0321 R2N8 : 0.0207
σ : 0.52
deviance : 124.59
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 997.2
memory length : 101
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.37
open length of G : 3.35

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
119.72 0.514 2.98 0.0473 0.301 2.92 -0.313 19.4 0.22 5.71 997.3 82 8.33 3.25
119.9 0.514 2.99 0.00479 0.3 6.26 -0.316 -- 0.219 5.74 997.3 82 8.33 3.25
119.95 0.51 2.98 0.0458 0.299 2.88 -- 19.6 0.221 5.61 997.3 90 8.35 3.19
119.95 0.51 2.99 0.000211 0.299 6.26 -- -- 0.221 5.61 997.3 89 8.36 3.26
124.59 0.52 2.98 0.0573 -- 2.76 -- 20.6 0.229 -- 997.3 102 8.34 3.28
158.85 0.591 2.99 0.0404 0.326 -- -0.227 -- 0.206 6.15 -- -- -- --
158.97 0.59 2.99 0.0381 0.325 -- -- -- 0.207 6.17 -- -- -- --
124.59 0.52 2.99 0.00982 -- 6.31 -- -- 0.229 -- 997.2 102 8.38 3.34
119.95 0.51 2.99 -- 0.299 6.26 -- -- 0.221 5.61 997.3 89 8.36 3.26
164.44 0.599 2.99 0.0472 -- -- -- -- 0.214 -- -- -- -- --
159.01 0.59 2.99 -- 0.325 -- -- -- 0.203 6.16 -- -- -- --
124.59 0.52 2.99 -- -- 6.31 -- -- 0.228 -- 997.2 101 8.37 3.35
164.49 0.599 2.99 -- -- -- -- -- 0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 134.55 atmosphere 1000.0 90 < th dose dependent rect. 8 3
35 142.01 temperature 25.0 720 > th dose independent rect. 24 2
52 143.38 atmosphere 1005.0 10 > th dose dependent rect. 2 1
55 143.50 atmosphere 1005.0 10 > th dose independent rect. 2 1
60 143.60 humidity 50.0 10 > th dose independent rect. 3 23
69 143.68 temperature 25.0 720 < th dose independent rect. 23 7
72 143.71 precipitation 0.1 30 < th dose independent rect. 3 23
74 143.71 precipitation 0.1 30 < th dose dependent rect. 3 23
75 143.73 wind 3.0 30 < th dose independent rect. 2 1
76 143.75 temperature 30.0 30 < th dose dependent rect. 2 1
78 143.76 temperature 25.0 30 < th dose independent rect. 2 1
82 143.80 wind 7.0 30 < th dose dependent rect. 2 1
86 143.81 temperature 10.0 30 > th dose independent rect. 2 1
88 143.81 temperature 25.0 90 > th dose independent rect. 2 1
90 143.81 humidity 50.0 30 > th dose independent rect. 2 1
93 143.81 atmosphere 995.0 30 > th dose independent rect. 2 1
95 143.81 atmosphere 1010.0 30 < th dose independent rect. 2 1
97 143.81 radiation 1.0 30 < th dose independent rect. 2 1
102 143.81 precipitation 0.1 30 < th dose independent rect. 2 1
103 143.81 temperature 10.0 30 > th dose independent rect. 3 23
104 143.81 atmosphere 995.0 30 > th dose independent rect. 3 23
105 143.81 temperature 25.0 90 > th dose dependent rect. 2 1
107 143.81 radiation 1.0 30 < th dose dependent rect. 2 1
112 143.81 precipitation 0.1 30 < th dose dependent rect. 2 1
116 143.86 temperature 10.0 30 > th dose dependent rect. 2 1
121 143.89 humidity 50.0 30 > th dose dependent rect. 2 1
122 143.89 radiation 10.0 43200 < th dose dependent rect. 3 1
131 143.95 wind 1.0 30 > th dose independent rect. 2 1
132 143.95 wind 9.0 1440 < th dose independent rect. 3 1
133 143.95 temperature 10.0 1440 > th dose independent rect. 3 1
136 143.95 temperature 30.0 1440 < th dose independent rect. 3 1
140 143.95 humidity 50.0 1440 > th dose independent rect. 3 1
149 143.95 atmosphere 995.0 1440 > th dose independent rect. 3 1
150 143.95 radiation 1.0 1440 < th dose independent rect. 3 1
170 143.95 temperature 10.0 1440 > th dose independent rect. 4 23
174 143.95 radiation 1.0 1440 < th dose dependent rect. 3 1
185 143.96 atmosphere 1015.0 30 < th dose dependent rect. 2 1
230 144.18 atmosphere 1000.0 10 < th dose independent rect. 9 1
263 144.74 temperature 25.0 720 > th dose dependent rect. 1 1
264 144.75 temperature 25.0 1440 < th dose independent rect. 1 1
265 144.75 wind 9.0 30 < th dose independent rect. 3 23
297 145.71 temperature 25.0 720 > th dose dependent rect. 23 4
324 146.64 temperature 25.0 720 > th dose dependent rect. 23 7
335 146.84 temperature 25.0 270 > th dose dependent rect. 5 1
399 147.91 temperature 25.0 90 > th dose dependent rect. 1 5
427 148.39 atmosphere 1015.0 30 < th dose independent rect. 3 23
482 149.06 atmosphere 1000.0 720 < th dose dependent rect. 1 9
565 149.55 humidity 70.0 10 > th dose independent rect. 9 1
573 149.59 temperature 25.0 270 > th dose independent rect. 5 2
676 150.46 atmosphere 995.0 1440 > th dose independent rect. 12 16
689 150.58 temperature 10.0 30 > th dose dependent rect. 3 23
715 150.81 temperature 25.0 90 > th dose independent rect. 1 5
719 150.82 atmosphere 1000.0 10 < th dose dependent rect. 4 8
792 151.21 wind 1.0 10 < th dose independent rect. 22 5
826 151.41 atmosphere 995.0 1440 > th dose independent rect. 12 9
827 151.41 atmosphere 995.0 1440 > th dose independent rect. 12 20
836 151.46 atmosphere 1000.0 720 < th dose dependent sin 7 NA
842 151.50 humidity 70.0 10 > th dose dependent rect. 10 1
847 151.53 precipitation 0.1 720 < th dose independent rect. 15 16
850 151.53 precipitation 0.1 720 < th dose dependent rect. 15 16
862 151.63 temperature 30.0 30 < th dose independent rect. 3 23
864 151.64 wind 1.0 10 < th dose independent rect. 11 16
873 151.69 humidity 90.0 90 < th dose independent rect. 1 2
882 151.74 temperature 25.0 720 < th dose independent sin 9 NA
884 151.74 atmosphere 995.0 1440 > th dose independent rect. 7 22
890 151.77 atmosphere 995.0 1440 > th dose independent rect. 12 7
893 151.78 atmosphere 995.0 1440 > th dose independent rect. 12 11
916 151.86 atmosphere 995.0 1440 > th dose independent rect. 16 12
939 151.98 precipitation 0.1 720 < th dose independent rect. 3 16
944 151.98 precipitation 0.1 720 < th dose dependent rect. 3 16
960 152.01 temperature 25.0 720 > th dose independent sin 9 NA
966 152.02 precipitation 0.1 720 < th dose independent rect. 3 19
967 152.02 precipitation 0.1 720 < th dose dependent rect. 3 19