Os03g0686100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0686100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.73 | 0.357 | 8.69 | -0.849 | 0.773 | -1.32 | 0.717 | -0.226 | 0.497 | 3.67 | 19.18 | 3315 | -- | -- |
| 57.75 | 0.354 | 8.69 | -0.85 | 0.773 | -1.23 | 0.722 | -- | 0.501 | 3.67 | 19.14 | 3316 | -- | -- |
| 59.26 | 0.359 | 8.69 | -0.843 | 0.774 | -1.31 | -- | -0.259 | 0.501 | 3.6 | 19.1 | 3295 | -- | -- |
| 59.26 | 0.359 | 8.71 | -0.939 | 0.767 | -1.14 | -- | -- | 0.469 | 3.5 | 19.62 | 5978 | -- | -- |
| 91.02 | 0.444 | 8.69 | -0.811 | -- | -1.42 | -- | -0.26 | 0.514 | -- | 19.18 | 2576 | -- | -- |
| 70.81 | 0.394 | 8.66 | -0.408 | 0.788 | -- | 0.649 | -- | 0.652 | 3.64 | -- | -- | -- | -- |
| 72.08 | 0.398 | 8.66 | -0.418 | 0.79 | -- | -- | -- | 0.649 | 3.61 | -- | -- | -- | -- |
| 91.03 | 0.444 | 8.7 | -0.829 | -- | -1.32 | -- | -- | 0.506 | -- | 19.27 | 2577 | -- | -- |
| 71.5 | 0.396 | 8.66 | -- | 0.817 | -0.937 | -- | -- | 0.661 | 3.47 | 19.62 | 5978 | -- | -- |
| 106.83 | 0.483 | 8.66 | -0.385 | -- | -- | -- | -- | 0.67 | -- | -- | -- | -- | -- |
| 76.69 | 0.41 | 8.65 | -- | 0.782 | -- | -- | -- | 0.695 | 3.62 | -- | -- | -- | -- |
| 103.86 | 0.475 | 8.68 | -- | -- | -0.632 | -- | -- | 0.598 | -- | 25.1 | 1102 | -- | -- |
| 110.74 | 0.491 | 8.65 | -- | -- | -- | -- | -- | 0.712 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 2 | 51.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 3 | 51.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 4 | 51.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 5 | 51.30 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 6 | 51.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 7 | 51.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 8 | 51.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 10 | 51.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 11 | 51.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 12 | 51.73 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 15 | 51.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 17 | 51.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 18 | 51.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 23 | 52.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 24 | 52.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 25 | 52.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 26 | 52.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 33 | 52.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 35 | 52.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 43 | 52.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 44 | 52.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 49 | 52.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 50 | 52.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 57 | 52.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 58 | 52.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 64 | 52.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 80 | 52.81 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 83 | 52.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 85 | 52.88 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 86 | 52.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 91 | 52.98 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 96 | 53.03 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 107 | 53.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 108 | 53.10 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 117 | 53.14 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 138 | 53.26 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 144 | 53.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 154 | 53.44 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 161 | 53.46 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 180 | 53.56 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 194 | 53.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 231 | 53.94 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 242 | 53.98 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 258 | 54.05 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 260 | 54.06 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 272 | 54.12 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 311 | 54.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 312 | 54.27 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 399 | 54.51 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 472 | 54.67 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 482 | 54.70 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 489 | 54.72 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 641 | 55.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 651 | 55.06 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 652 | 55.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 662 | 55.08 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 691 | 55.12 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 692 | 55.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 696 | 55.13 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 759 | 55.23 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 769 | 55.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 777 | 55.26 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 793 | 55.27 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 821 | 55.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 822 | 55.31 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 8 |
| 845 | 55.35 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 8 |
| 854 | 55.36 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 899 | 55.41 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 900 | 55.41 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 938 | 55.44 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 944 | 55.44 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 8 |
| 947 | 55.44 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 955 | 55.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 973 | 55.47 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |