Os03g0685900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0685900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.72 | 0.154 | 14.1 | -0.315 | 0.177 | 0.612 | -0.225 | 0.142 | 0.0432 | 22.9 | 22.03 | 83 | -- | -- |
| 10.73 | 0.153 | 14.1 | -0.336 | 0.176 | 0.617 | -0.252 | -- | 0.0396 | 22.8 | 22.1 | 84 | -- | -- |
| 10.86 | 0.155 | 14.1 | -0.252 | 0.221 | 0.609 | -- | 0.458 | 0.0579 | 22.4 | 22.03 | 83 | -- | -- |
| 10.97 | 0.154 | 14.1 | -0.331 | 0.194 | 0.632 | -- | -- | 0.0392 | 22.7 | 22.13 | 54 | -- | -- |
| 11.97 | 0.161 | 14.1 | -0.292 | -- | 0.553 | -- | 0.108 | 0.0579 | -- | 21.85 | 300 | -- | -- |
| 17.58 | 0.197 | 14.1 | -0.196 | 0.24 | -- | 0.157 | -- | 0.138 | 18 | -- | -- | -- | -- |
| 17.62 | 0.197 | 14.1 | -0.198 | 0.241 | -- | -- | -- | 0.139 | 18.2 | -- | -- | -- | -- |
| 11.87 | 0.16 | 14.1 | -0.347 | -- | 0.613 | -- | -- | 0.0323 | -- | 18.92 | 404 | -- | -- |
| 13.66 | 0.173 | 14.1 | -- | 0.208 | 0.543 | -- | -- | 0.0861 | 21.8 | 22.19 | 43 | -- | -- |
| 20.64 | 0.212 | 14.1 | -0.205 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 18.66 | 0.202 | 14.1 | -- | 0.244 | -- | -- | -- | 0.161 | 18.2 | -- | -- | -- | -- |
| 14.47 | 0.177 | 14.1 | -- | -- | 0.5 | -- | -- | 0.102 | -- | 23.26 | 285 | -- | -- |
| 21.74 | 0.218 | 14.1 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.48 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 16 |
| 3 | 10.54 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 5 | 10.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 7 | 10.56 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 21 | 10.69 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 31 | 10.73 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 33 | 10.75 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 36 | 10.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 76 | 10.88 | temperature | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 88 | 10.90 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 118 | 10.95 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 130 | 10.97 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 135 | 10.98 | temperature | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 229 | 11.13 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 412 | 11.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 413 | 11.25 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 465 | 11.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 491 | 11.31 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 609 | 11.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 649 | 11.44 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 663 | 11.44 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 677 | 11.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 698 | 11.47 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 710 | 11.47 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 712 | 11.47 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 714 | 11.48 | temperature | 30.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 730 | 11.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 768 | 11.52 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 839 | 11.57 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 843 | 11.58 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 878 | 11.60 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 925 | 11.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 927 | 11.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 932 | 11.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 957 | 11.64 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 19 | 23 |