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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0685800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.31 (0.0239) R2 : 0.00118
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0369 (0.0503) R2dN8 : 0.00152 R2N8 : 0.00118
σ : 0.449
deviance : 92.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.86 0.438 3.16 1.31 0.143 -0.74 0.0927 5.8 0.204 9.23 29.4 6062 -- --
90.83 0.444 3.29 0.192 0.116 -0.191 0.165 -- 0.111 8.93 16.69 8823 -- --
86.86 0.434 3.16 1.32 0.139 -0.744 -- 5.82 0.209 9.19 29.4 6089 -- --
90.68 0.444 3.29 0.209 0.134 -0.234 -- -- 0.109 7.18 2.87 7430 -- --
87.93 0.437 3.17 1.28 -- -0.713 -- 5.51 0.212 -- 29.31 6122 -- --
91.53 0.449 3.3 0.0841 0.133 -- 0.127 -- 0.045 7.7 -- -- -- --
91.56 0.448 3.3 0.0866 0.135 -- -- -- 0.0444 7.27 -- -- -- --
91.62 0.446 3.29 0.209 -- -0.236 -- -- 0.111 -- 8.719 7704 -- --
91.46 0.445 3.3 -- 0.137 -0.114 -- -- 0.0589 7.13 5.545 7400 -- --
92.53 0.449 3.3 0.089 -- -- -- -- 0.0467 -- -- -- -- --
91.76 0.448 3.3 -- 0.136 -- -- -- 0.0348 7.23 -- -- -- --
92.37 0.448 3.3 -- -- -0.104 -- -- 0.06 -- 18.84 6296 -- --
92.74 0.449 3.31 -- -- -- -- -- 0.0369 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.25 atmosphere 1015.0 30 < th dose dependent rect. 2 1
2 80.33 wind 3.0 10 < th dose dependent rect. 2 1
3 80.38 wind 1.0 30 < th dose independent rect. 2 1
16 80.48 temperature 10.0 30 > th dose independent rect. 2 1
18 80.48 temperature 25.0 30 < th dose independent rect. 2 1
20 80.48 humidity 50.0 30 > th dose independent rect. 2 1
23 80.48 atmosphere 995.0 30 > th dose independent rect. 2 1
24 80.48 atmosphere 1010.0 30 < th dose independent rect. 2 1
26 80.48 radiation 1.0 30 < th dose independent rect. 2 1
31 80.48 precipitation 0.1 30 < th dose independent rect. 2 1
32 80.48 temperature 10.0 30 > th dose independent rect. 3 23
33 80.48 radiation 1.0 30 < th dose dependent rect. 2 1
38 80.48 precipitation 0.1 30 < th dose dependent rect. 2 1
39 80.49 humidity 50.0 30 > th dose dependent rect. 2 1
40 80.50 temperature 30.0 30 < th dose dependent rect. 2 1
42 80.51 temperature 10.0 30 > th dose dependent rect. 2 1
52 80.58 atmosphere 1005.0 30 > th dose dependent rect. 2 1
56 80.66 atmosphere 995.0 30 > th dose dependent rect. 2 1
88 80.77 atmosphere 1005.0 30 > th dose independent rect. 2 1
95 80.97 wind 1.0 30 > th dose independent rect. 2 1
98 80.98 wind 9.0 30 < th dose independent rect. 3 23
107 82.14 temperature 10.0 720 > th dose independent rect. 15 8
108 82.14 temperature 10.0 720 > th dose independent rect. 23 16
109 82.22 temperature 10.0 720 > th dose independent rect. 3 8
110 82.22 atmosphere 995.0 720 > th dose independent rect. 3 8
111 82.22 temperature 10.0 720 > th dose independent rect. 11 16
112 82.29 precipitation 0.1 720 < th dose independent rect. 15 8
113 82.29 precipitation 0.1 720 < th dose dependent rect. 15 8
114 82.43 atmosphere 995.0 720 > th dose independent rect. 23 16
115 82.45 wind 9.0 720 < th dose independent rect. 3 8
117 82.71 humidity 50.0 720 > th dose independent rect. 3 8
118 82.82 atmosphere 995.0 30 > th dose independent rect. 3 23
121 83.12 atmosphere 1015.0 720 < th dose independent rect. 3 8
122 83.21 precipitation 0.1 720 < th dose independent rect. 11 16
123 83.21 precipitation 0.1 720 < th dose dependent rect. 11 16
124 83.29 precipitation 0.1 720 < th dose independent rect. 3 8
125 83.29 precipitation 0.1 720 < th dose dependent rect. 3 8
126 83.48 radiation 40.0 720 < th dose independent rect. 15 8
132 83.75 precipitation 0.1 720 < th dose independent rect. 23 16
133 83.75 precipitation 0.1 720 < th dose dependent rect. 23 16
136 83.95 atmosphere 995.0 720 > th dose independent rect. 11 16
137 84.02 atmosphere 995.0 720 > th dose independent rect. 15 8
140 84.12 radiation 10.0 43200 < th dose dependent rect. 23 1
147 84.43 atmosphere 1000.0 30 > th dose independent rect. 23 23
151 84.59 precipitation 0.1 30 < th dose independent rect. 3 23
152 84.59 precipitation 0.1 30 < th dose dependent rect. 3 23
153 84.66 wind 9.0 720 < th dose independent rect. 15 8
158 84.94 radiation 10.0 4320 < th dose dependent rect. 23 1
168 85.09 temperature 25.0 30 > th dose independent rect. 22 1
169 85.10 wind 9.0 1440 < th dose independent rect. 23 1
170 85.10 temperature 10.0 1440 > th dose independent rect. 23 1
173 85.10 temperature 30.0 1440 < th dose independent rect. 23 1
177 85.10 humidity 50.0 1440 > th dose independent rect. 23 1
187 85.10 atmosphere 995.0 1440 > th dose independent rect. 23 1
188 85.10 radiation 1.0 1440 < th dose independent rect. 23 1
208 85.10 temperature 10.0 1440 > th dose independent rect. 24 23
218 85.13 temperature 25.0 30 > th dose dependent rect. 22 1
220 85.18 wind 3.0 30 < th dose independent rect. 22 1
222 85.19 atmosphere 1005.0 30 > th dose dependent rect. 22 1
223 85.20 humidity 80.0 30 > th dose independent rect. 22 1
226 85.24 humidity 90.0 30 < th dose independent rect. 22 1
229 85.27 atmosphere 1005.0 30 > th dose independent rect. 22 1
231 85.28 wind 5.0 30 < th dose dependent rect. 22 1
232 85.29 wind 1.0 30 > th dose independent rect. 22 1
236 85.31 precipitation 0.1 30 < th dose independent rect. 22 1
237 85.31 precipitation 0.1 1440 < th dose independent rect. 23 1
238 85.31 wind 9.0 720 < th dose independent rect. 23 16
239 85.31 precipitation 0.1 30 < th dose dependent rect. 22 1
240 85.31 precipitation 0.1 1440 < th dose dependent rect. 23 1
243 85.32 temperature 10.0 30 > th dose independent rect. 22 1
245 85.32 temperature 30.0 30 < th dose independent rect. 22 1
246 85.32 humidity 50.0 30 > th dose independent rect. 22 1
249 85.32 atmosphere 995.0 30 > th dose independent rect. 22 1
251 85.32 atmosphere 1010.0 30 < th dose independent rect. 22 1
253 85.32 radiation 1.0 30 < th dose independent rect. 22 1
258 85.32 temperature 10.0 30 > th dose independent rect. 23 23
259 85.32 humidity 50.0 30 > th dose dependent rect. 22 1
262 85.32 radiation 1.0 30 < th dose dependent rect. 22 1
273 85.44 atmosphere 1015.0 30 < th dose dependent rect. 22 1
274 85.46 humidity 90.0 30 < th dose dependent rect. 22 1
279 85.52 wind 1.0 30 > th dose dependent rect. 22 1
283 85.59 radiation 1.0 43200 < th dose dependent rect. 3 1
284 85.61 wind 9.0 4320 < th dose independent rect. 3 1
285 85.61 wind 1.0 720 > th dose independent rect. 15 8
287 85.62 precipitation 0.1 30 < th dose independent rect. 23 23
288 85.62 temperature 30.0 30 < th dose dependent rect. 22 1
290 85.62 precipitation 0.1 30 < th dose dependent rect. 23 23
341 85.91 wind 9.0 30 < th dose independent rect. 23 23
351 85.99 temperature 10.0 1440 > th dose independent rect. 3 1
354 85.99 temperature 30.0 1440 < th dose independent rect. 3 1
358 85.99 humidity 50.0 1440 > th dose independent rect. 3 1
367 85.99 atmosphere 995.0 1440 > th dose independent rect. 3 1
368 85.99 radiation 1.0 1440 < th dose independent rect. 3 1
388 85.99 temperature 10.0 1440 > th dose independent rect. 4 23
391 85.99 radiation 1.0 1440 < th dose dependent rect. 3 1
421 86.18 humidity 90.0 90 < th dose independent rect. 2 1
424 86.23 humidity 50.0 30 > th dose independent rect. 3 23
435 86.40 humidity 50.0 720 > th dose independent rect. 23 16
439 86.44 wind 9.0 720 < th dose independent rect. 11 16
482 86.69 humidity 50.0 30 > th dose independent rect. 23 23
493 86.81 wind 1.0 10 > th dose independent rect. 23 23
501 86.92 humidity 80.0 14400 < th dose dependent rect. 3 6
505 86.94 atmosphere 1015.0 30 < th dose independent rect. 3 23
506 86.99 humidity 90.0 720 < th dose independent rect. 2 1
513 87.07 humidity 90.0 720 < th dose independent rect. 1 3
518 87.14 temperature 30.0 720 < th dose independent rect. 15 8
525 87.20 wind 1.0 30 > th dose dependent rect. 2 1
528 87.25 temperature 10.0 30 > th dose dependent rect. 3 23
570 87.46 humidity 70.0 14400 > th dose independent rect. 8 1
571 87.49 wind 5.0 14400 < th dose independent rect. 11 1
578 87.52 humidity 90.0 90 < th dose independent rect. 1 5
590 87.64 humidity 70.0 14400 < th dose independent rect. 8 1
595 87.67 humidity 70.0 14400 > th dose independent rect. 4 5
596 87.67 atmosphere 1000.0 10 > th dose independent rect. 14 12
600 87.68 humidity 70.0 14400 > th dose independent rect. 24 9
601 87.68 humidity 70.0 14400 > th dose independent rect. 22 11
610 87.69 wind 9.0 30 < th dose dependent rect. 3 23
611 87.70 atmosphere 1015.0 1440 < th dose independent rect. 3 1
614 87.71 humidity 90.0 720 > th dose independent rect. 3 1
621 87.77 radiation 40.0 30 < th dose independent rect. 14 12
622 87.77 radiation 10.0 10 < th dose independent rect. 3 23
624 87.79 wind 5.0 14400 > th dose independent rect. 11 1
635 87.83 humidity 80.0 720 > th dose dependent rect. 3 1
639 87.85 radiation 40.0 10 < th dose independent rect. 3 23
643 87.89 humidity 70.0 14400 < th dose independent rect. 6 3
654 87.89 humidity 90.0 720 < th dose dependent rect. 1 2
655 87.89 temperature 10.0 30 > th dose dependent rect. 23 23
659 87.90 wind 3.0 14400 > th dose dependent rect. 11 1
663 87.92 radiation 40.0 90 < th dose dependent rect. 13 14
671 87.96 wind 9.0 10 < th dose independent rect. 14 12
672 87.96 humidity 60.0 10 > th dose independent rect. 14 12
673 87.96 radiation 10.0 10 < th dose dependent rect. 3 23
679 87.98 temperature 25.0 270 > th dose independent rect. 19 8
680 87.98 atmosphere 1000.0 10 > th dose independent rect. 2 12
681 87.98 atmosphere 1015.0 720 < th dose independent rect. 23 16
684 87.99 atmosphere 995.0 720 > th dose independent rect. 3 23
688 88.00 atmosphere 1000.0 720 > th dose independent rect. 23 8
696 88.03 humidity 90.0 10 > th dose independent rect. 24 3
700 88.05 radiation 40.0 90 < th dose independent rect. 12 15
705 88.07 atmosphere 995.0 720 > th dose independent rect. 14 1
708 88.07 atmosphere 1000.0 720 > th dose independent rect. 19 16
710 88.08 atmosphere 995.0 720 > th dose independent rect. 15 23
719 88.11 wind 7.0 14400 < th dose dependent rect. 11 1
722 88.12 temperature 20.0 720 > th dose dependent rect. 3 1
723 88.13 wind 5.0 14400 < th dose independent rect. 10 5
736 88.15 wind 1.0 14400 < th dose dependent rect. 6 1
738 88.16 temperature 10.0 10 > th dose independent rect. 2 12
740 88.16 temperature 10.0 10 > th dose independent rect. 14 12
742 88.16 atmosphere 1015.0 10 < th dose independent rect. 2 12
746 88.18 precipitation 0.1 720 < th dose independent rect. 14 1
749 88.18 wind 5.0 14400 > th dose independent rect. 10 5
750 88.18 precipitation 0.1 720 < th dose dependent rect. 14 1
753 88.19 temperature 25.0 720 > th dose independent rect. 3 6
754 88.19 wind 1.0 10 < th dose independent rect. 14 13
766 88.20 precipitation 0.1 30 < th dose independent rect. 2 12
768 88.20 precipitation 0.1 30 < th dose dependent rect. 2 12
775 88.21 temperature 25.0 720 > th dose dependent rect. 3 5
801 88.23 temperature 10.0 1440 > th dose independent rect. 3 12
804 88.23 temperature 10.0 1440 > th dose independent rect. 15 12
814 88.24 wind 1.0 720 > th dose independent rect. 14 1
815 88.24 temperature 10.0 720 > th dose independent rect. 14 1
816 88.24 atmosphere 1015.0 720 < th dose independent rect. 14 1
817 88.24 precipitation 0.1 720 < th dose independent rect. 2 1
820 88.24 temperature 10.0 720 > th dose independent rect. 15 23
821 88.24 precipitation 0.1 720 < th dose dependent rect. 2 1
824 88.25 radiation 20.0 720 > th dose independent rect. 15 1
827 88.25 wind 1.0 10 < th dose independent rect. 17 10
829 88.25 precipitation 0.1 30 < th dose independent rect. 14 12
832 88.25 precipitation 0.1 30 < th dose dependent rect. 14 12
833 88.26 temperature 20.0 30 > th dose independent rect. 3 4
843 88.28 wind 1.0 10 < th dose independent rect. 21 6
848 88.28 temperature 30.0 10 < th dose independent rect. 23 23
867 88.33 wind 9.0 10 < th dose independent rect. 2 12
897 88.37 atmosphere 995.0 1440 > th dose independent rect. 3 12
910 88.38 humidity 50.0 10 > th dose independent rect. 2 12
916 88.39 wind 9.0 720 < th dose independent rect. 14 1
978 88.43 temperature 25.0 720 > th dose dependent rect. 24 9
980 88.44 wind 3.0 30 < th dose dependent rect. 22 5
987 88.45 temperature 10.0 720 > th dose dependent rect. 3 1
989 88.45 radiation 40.0 10 < th dose dependent rect. 3 23