Os03g0684500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0684500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.55 | 0.347 | 8.14 | 1.9 | 0.735 | 0.675 | -0.493 | -0.355 | 0.384 | 0.34 | 19.4 | 4145 | -- | -- |
| 54.56 | 0.344 | 8.16 | 1.85 | 0.727 | 0.769 | -0.454 | -- | 0.385 | 0.371 | 18.9 | 4191 | -- | -- |
| 55.51 | 0.347 | 8.14 | 1.91 | 0.742 | 0.664 | -- | -0.358 | 0.38 | 0.529 | 19.4 | 4200 | -- | -- |
| 55.45 | 0.347 | 8.15 | 1.89 | 0.735 | 0.793 | -- | -- | 0.373 | 0.577 | 19 | 4202 | -- | -- |
| 88.18 | 0.44 | 8.15 | 1.64 | -- | 0.446 | -- | -0.482 | 0.291 | -- | 19.4 | 4200 | -- | -- |
| 63.82 | 0.375 | 8.2 | 1.41 | 0.717 | -- | -0.503 | -- | 0.193 | 0.225 | -- | -- | -- | -- |
| 64.8 | 0.377 | 8.19 | 1.43 | 0.721 | -- | -- | -- | 0.194 | 0.465 | -- | -- | -- | -- |
| 88.68 | 0.439 | 8.14 | 1.9 | -- | 0.766 | -- | -- | 0.374 | -- | 18.9 | 4442 | -- | -- |
| 102.71 | 0.472 | 8.26 | -- | 0.758 | -0.573 | -- | -- | 0.0521 | 1.2 | 12 | 13445 | -- | -- |
| 97.43 | 0.461 | 8.18 | 1.45 | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
| 118.35 | 0.509 | 8.23 | -- | 0.742 | -- | -- | -- | 0.0356 | 0.562 | -- | -- | -- | -- |
| 118.83 | 0.508 | 8.28 | -- | -- | -0.855 | -- | -- | -0.248 | -- | 21.72 | 47520 | -- | -- |
| 152.89 | 0.577 | 8.22 | -- | -- | -- | -- | -- | 0.0454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 10 |
| 3 | 51.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 17 | 52.20 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 23 | 52.30 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 25 | 52.38 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 6 |
| 35 | 52.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 42 | 52.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 47 | 52.78 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 15 |
| 64 | 52.93 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 79 | 53.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 90 | 53.18 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 94 | 53.24 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 96 | 53.25 | radiation | 20 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 105 | 53.32 | radiation | 30 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 122 | 53.41 | radiation | 10 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 130 | 53.47 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 134 | 53.49 | radiation | 1 | 720 | < th | dose dependent | sin | 9 | NA |
| 146 | 53.53 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 10 | 12 |
| 149 | 53.54 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 150 | 53.54 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 151 | 53.54 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 155 | 53.55 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 159 | 53.55 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 162 | 53.55 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 19 | NA |
| 173 | 53.56 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 176 | 53.56 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 191 | 53.57 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 204 | 53.58 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 231 | 53.59 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 238 | 53.60 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 258 | 53.61 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 272 | 53.62 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 11 |
| 284 | 53.63 | wind | 1 | 720 | > th | dose independent | rect. | 3 | 17 |
| 317 | 53.66 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 324 | 53.66 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 356 | 53.68 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 364 | 53.69 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 502 | 53.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 513 | 53.81 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 20 | NA |
| 540 | 53.83 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 20 | NA |
| 565 | 53.84 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 3 | 16 |
| 657 | 53.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 752 | 53.95 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 793 | 53.97 | atmosphere | 1015 | 43200 | > th | dose dependent | no | NA | NA |
| 808 | 53.97 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 823 | 53.98 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 16 | 21 |
| 928 | 54.02 | temperature | 10 | 43200 | > th | dose independent | rect. | 15 | 5 |