Os03g0683700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF810 family protein.
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Os03g0683700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF810 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.63 | 0.203 | 9.13 | 0.335 | 0.409 | -0.053 | -0.0519 | -1.31 | 0.0917 | 4.29 | 64 | 5272 | -- | -- |
| 20.75 | 0.212 | 9.12 | 0.366 | 0.432 | -0.132 | -0.063 | -- | 0.121 | 4.43 | 65 | 4100 | -- | -- |
| 18.64 | 0.201 | 9.13 | 0.335 | 0.408 | -0.0517 | -- | -1.31 | 0.0919 | 4.28 | 64.31 | 5263 | -- | -- |
| 20.69 | 0.212 | 9.11 | 0.367 | 0.411 | -0.14 | -- | -- | 0.139 | 4.35 | 63 | 4116 | -- | -- |
| 27.54 | 0.244 | 9.13 | 0.362 | -- | -0.111 | -- | -1.34 | 0.111 | -- | 64.55 | 5411 | -- | -- |
| 21.07 | 0.215 | 9.12 | 0.362 | 0.414 | -- | -0.0312 | -- | 0.104 | 4.23 | -- | -- | -- | -- |
| 21.07 | 0.215 | 9.12 | 0.363 | 0.414 | -- | -- | -- | 0.104 | 4.22 | -- | -- | -- | -- |
| 28.9 | 0.251 | 9.13 | 0.377 | -- | 0.172 | -- | -- | 0.0939 | -- | 64.6 | 5569 | -- | -- |
| 23.84 | 0.227 | 9.12 | -- | 0.417 | -0.159 | -- | -- | 0.119 | 4.36 | 61 | 2481 | -- | -- |
| 30.34 | 0.257 | 9.13 | 0.379 | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
| 24.54 | 0.232 | 9.13 | -- | 0.421 | -- | -- | -- | 0.064 | 4.2 | -- | -- | -- | -- |
| 30.91 | 0.259 | 9.14 | -- | -- | 0.372 | -- | -- | 0.0634 | -- | 65.98 | 47520 | -- | -- |
| 34.14 | 0.273 | 9.13 | -- | -- | -- | -- | -- | 0.0734 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 13 | 17.94 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 13 |
| 18 | 17.99 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 21 | 18.02 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 31 | 18.05 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 10 |
| 33 | 18.06 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 50 | 18.14 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 58 | 18.16 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 81 | 18.23 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 21 |
| 89 | 18.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 108 | 18.31 | temperature | 25 | 270 | < th | dose independent | sin | 10 | NA |
| 124 | 18.34 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 128 | 18.35 | wind | 1 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 129 | 18.35 | wind | 5 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 132 | 18.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 166 | 18.40 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 14 |
| 169 | 18.41 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 187 | 18.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 24 | 13 |
| 250 | 18.49 | wind | 3 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 256 | 18.50 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 2 |
| 289 | 18.53 | wind | 3 | 14400 | < th | dose independent | sin | 8 | NA |
| 297 | 18.54 | wind | 3 | 14400 | > th | dose independent | sin | 7 | NA |
| 304 | 18.54 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 319 | 18.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 323 | 18.56 | temperature | 25 | 270 | > th | dose independent | sin | 8 | NA |
| 332 | 18.56 | wind | 5 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 356 | 18.58 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 22 |
| 373 | 18.59 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 385 | 18.59 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 388 | 18.60 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 414 | 18.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 435 | 18.62 | humidity | 50 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 449 | 18.63 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 471 | 18.64 | wind | 1 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 484 | 18.64 | humidity | 90 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 510 | 18.65 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 530 | 18.66 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 572 | 18.68 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 14 |
| 588 | 18.69 | humidity | 70 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 633 | 18.71 | wind | 1 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 634 | 18.71 | temperature | 25 | 720 | > th | dose independent | rect. | 24 | 1 |
| 664 | 18.71 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 673 | 18.72 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 675 | 18.72 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 12 |
| 692 | 18.72 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 12 |
| 701 | 18.73 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 737 | 18.74 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 738 | 18.74 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 754 | 18.74 | wind | 5 | 14400 | < th | dose dependent | sin | 7 | NA |
| 789 | 18.75 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 867 | 18.77 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 19 |
| 875 | 18.77 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 906 | 18.78 | wind | 9 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 920 | 18.78 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 15 |
| 930 | 18.78 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 932 | 18.78 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 961 | 18.79 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |